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What Cross-reference data files to use and where to get for lung cancer #49

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JiaweiDai-create opened this issue Oct 5, 2020 · 0 comments
Open

What Cross-reference data files to use and where to get for lung cancer #49

JiaweiDai-create opened this issue Oct 5, 2020 · 0 comments

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@JiaweiDai-create
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Hi,
Thank you for develop such a good tool! I was able to run CharGer sucessfully, but all variants are classified as "Benign" in the column "CharGer_Classification" if I didn't use parameters -l -O --mac-clinvar-tsv.
I found that there are also many Cross-reference data files. But I'm not sure what Cross-reference data files can help to improve my results and where to acquire them. The disease of my samples is lung cancer. Would you mind provide some sugesstions?
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