Refreshing Search after switching from Cleared to Histological Dataset #14
Comments
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Could you please give me a diagram or list for filters as like below list? Users may don't notice previously selected filters updates automatically. It can cause confusion for users. Gene dropdown updates => Organ |
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Perhaps it would be easier to make empty dataset text grey, italic, none selectable, and put "(empty)" beside the text for categories for which there is no data? This might be easier to navigate than hiding the selection? Gene updates => organ, experiment, sample I believe there is a delay in the update occurring. Perhaps it processes this after loading all the image thumbnails or something? |
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I think we need to keep selected filter somewhere and that is changeable from other filters. From the below list, it updates your previously selected filters. For example: step => user selects "gene", step 2: user selects "sample type" but it updates your previously selected gene. So we need to lock the selected filters. Gene updates => organ, experiment, sample We need to keep track of previously selected filters that cannot be able to changeable unless the user deletes the filter selection. Please see the below example. |
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OK. But we aren't going to use this kind of approach, right? Because unlike a list to shop from the user should only be delivered one selected dataset at a time. The primary issue is that when changing options the organ list does not update when changing choices in the drop downs. It updates once we begin browsing the images, could we just queue in a page refresh when they change the drop down options? |
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Completed |
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This is working but there are two changes that need to be made: Make nothing update experiment and have "Experiment" default to Ai9 as we have no other data type for this at the moment and it results in excessive clicking by the user. Sample type needs to always display histology and clearing, as we discussed, so that users can switch to cleared and see what datasets are available to browse at any time. If necessary we can put "sample type" at the top above Gene/Organ etc. to indicate to the user that this is the primary selection for browsing. Default to choosing Histological for this and the user can switch clearing. |
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Also let's default to content-containing datasets rather than "select" -- or if we are using the "select" as a blank display no data until all choice fields have a selection. The website is currently displaying random data if a field is not chosen. |
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Currently, it is not displaying anything if all of the fields selected "select" option. If you select a different choice other than "select", It will display data filtered by your choice but not displaying random data. If you want to change default selection to first data(other than "select") from the dropdown list, please let me know. |
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Got it. Sorry, here is what I mean (see screen shot). Choosing "GPR68" loads 268 images and the buttons for every available mouse dataset (cleared and histology). Let's have the user select Sample Type (move to top, master selector) Have "sample type" dictate what gene/organs the user can choose from. If they select an organ have that update the gene, if they select a gene, have that update the organ. For default selections: Also if the user comes in from the homepage by clicking the representative image link "Click here to see full dataset" the list fills for Gene and Organ but not for sample type and experiment. It should select in to those values as well. Let me know if that's unclear, can chat on phone too! |
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Updated. Please let me know if you have any comments. |
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Sample Type needs to always be able to toggle between histology and cleared and I think we should move it to the top of the list of categories on the webpage. Defaults working well now. |
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Is it ok to display not found msg when there is no data related to the selected Sample type? |
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If the toggle between cleared and histology can we default clear all other
selections?
…On Fri, Sep 20, 2019, 12:36 PM Chinzo Dandar ***@***.***> wrote:
Is it ok to display not found msg when there is no data related to the
selected Sample type?
Another solution to see both sample types is adding a new button that
clears the current selection of all dropdowns. It means that you can see
all the possible values for all dropdowns.
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Does "clear all other selections" mean that changing other selections to "select"? |
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Yes. Or better, cause it to default to the first available dataset.
…On Fri, Sep 20, 2019, 1:00 PM Chinzo Dandar ***@***.***> wrote:
Does "clear all other selections" mean that changing other selections to
"select"?
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Got you. Could you please change below update rules again? Gene updates => organ, experiment, sample |
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Could you please check the following update rules? If it looks good, I am gonna change dropdowns 1.Sample type updates => Gene, Organ, Experiment /Change other dropdowns to "select" option/ |
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Hi Chinzo - That looks good to me - the Experiment categories may expand from one (n=1) and change at that point. Thanks -Noah
…________________________________
From: Chinzo Dandar <notifications@github.com>
Sent: Monday, September 23, 2019 2:24 PM
To: docking-org/AMIS <AMIS@noreply.github.com>
Cc: Sciaky, Noah <noah_sciaky@med.unc.edu>; Author <author@noreply.github.com>
Subject: Re: [docking-org/AMIS] Refreshing Search after switching from Cleared to Histological Dataset (#14)
Could you please check the following update rules? If it looks good, I am gonna change dropdowns
1.Sample type updates => Gene, Organ, Experiment /Change other dropdowns to "select" option/
2.Gene updates => organ, experiment
3.Organ updates => experiment
4.Experiment => nothing
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Hi Chinzo - Justin had another point he wanted to raise about #3 (Organ Updates) option. He'll send out an email. -Noah
…________________________________
From: Chinzo Dandar <notifications@github.com>
Sent: Monday, September 23, 2019 2:24 PM
To: docking-org/AMIS <AMIS@noreply.github.com>
Cc: Sciaky, Noah <noah_sciaky@med.unc.edu>; Author <author@noreply.github.com>
Subject: Re: [docking-org/AMIS] Refreshing Search after switching from Cleared to Histological Dataset (#14)
Could you please check the following update rules? If it looks good, I am gonna change dropdowns
1.Sample type updates => Gene, Organ, Experiment /Change other dropdowns to "select" option/
2.Gene updates => organ, experiment
3.Organ updates => experiment
4.Experiment => nothing
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Hey there,
Sorry about this. I didn't loop back for your previous request Chinzo. Can we do the following:
1.Sample type updates => Gene, Organ, Experiment /Change other dropdowns to "select" option/
2.Gene updates => organ, experiment
3.Organ updates => GENE, experiment
4.Experiment => nothing
with experiment defaulted at all times to Ai9.
It should be possible for a user to choose histology or cleared in #1 and then select either an option from #2 or #3 to innumerate the other list. Fine if a choice in #2 or #3 locks the filtering after. We can put a "clear selection" button as you mentioned to facilitate?
Justin G. English, PhD
Laboratory of Bryan Roth, MD PhD
UNC Chapel Hill Department of Pharmacology
…________________________________________
From: Sciaky, Noah <noah_sciaky@med.unc.edu>
Sent: Monday, September 23, 2019 2:58 PM
To: docking-org/AMIS; docking-org/AMIS
Cc: Author; English, Justin
Subject: Re: [docking-org/AMIS] Refreshing Search after switching from Cleared to Histological Dataset (#14)
Hi Chinzo - Justin had another point he wanted to raise about #3 (Organ Updates) option. He'll send out an email. -Noah
________________________________
From: Chinzo Dandar <notifications@github.com>
Sent: Monday, September 23, 2019 2:24 PM
To: docking-org/AMIS <AMIS@noreply.github.com>
Cc: Sciaky, Noah <noah_sciaky@med.unc.edu>; Author <author@noreply.github.com>
Subject: Re: [docking-org/AMIS] Refreshing Search after switching from Cleared to Histological Dataset (#14)
Could you please check the following update rules? If it looks good, I am gonna change dropdowns
1.Sample type updates => Gene, Organ, Experiment /Change other dropdowns to "select" option/
2.Gene updates => organ, experiment
3.Organ updates => experiment
4.Experiment => nothing
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Fixed. Please check it |
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Great. When switching Sample Type let's have the selections default to the first choice in each drop down (same as when coming to the image browser for the first time). Right now it tries to load every image in histological or cleared datasets when toggling between them. |
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Also let's default experiment to Ai9 for every selection unless the users changes it otherwise. |
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Clearing all filters and then loading a sample type still causes all the data on the server to load to the browser at once. Probably should restrict loading of any files until sample type, gene, and organ have been chosen. No one will want to see any data displays before that time as it is not organized or annotated. |
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So that means - as it is now one would make 3 selections before any updating the website's screen. - Noah
1) Sample Type --> Histological (No Update)
2) Gene --> GPCR85 (No Update)
3) Organ --> brain (Now an update)
4) Experiment --> Ai9 (by default)
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To: docking-org/AMIS <AMIS@noreply.github.com>
Cc: Sciaky, Noah <noah_sciaky@med.unc.edu>; Author <author@noreply.github.com>
Subject: Re: [docking-org/AMIS] Refreshing Search after switching from Cleared to Histological Dataset (#14)
Clearing all filters and then loading a sample type still causes all the data on the server to load to the browser at once. Probably should restrict loading of any files until sample type, gene, and organ have been chosen. No one will want to see any data displays before that time as it is not organized or annotated.
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Hi Justin & Noah, I have a couple of questions to clarify your request.
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Answer 2 We could put an image in the top left corner of the 6 image viewer that says something like this could be the only thing that populates the table until all 3 drop downs have a selection. In it's current state if a user selects "cleared" as the sample type and nothing else the server attempts to load thousands and thousands of images without context. |
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Updated. Please check. |
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Filtering is now failing. If I select "Cleared" as the Sample Type it allows me to choose GPR85>bladder for which there is no data available. Switching to histological works and clears the other selections allowing me to re-select. Let's remove "select" from experiment type and default to Ai9 and we can add others later -- because currently leaving this unselected still displays data and this may confuse users. |
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Fixed. Please check |
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Looks great - but needs some type of instruction for the user how to proceed. |
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I have changed the unselected(sample type, gene, organ) dropdown's color to red. Please test it and if you think it is not enough for instruction, I will add some text under the dropdown fields. |
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I believe we were going to add text in the image display fiels when no
images were being displayed instructing user to make a choice. Text beside
the dropdown may also work?
…On Tue, Oct 22, 2019, 6:19 PM Chinzo Dandar ***@***.***> wrote:
I have changed the unselected(sample type, gene, organ) dropdown's color
to red. Please test it and if you think it is not enough for instruction, I
will add some text under the dropdown fields.
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Hi Chinzo -
I like that (red font) a lot - a simple way of guiding visitors.
We might have a small to modest addition to the web site soon - and after that, we should show some scientists/guinea pigs
our web site and see what types of issues they experience.
…-Noah
________________________________
From: Chinzo Dandar <notifications@github.com>
Sent: Tuesday, October 22, 2019 6:19 PM
To: docking-org/AMIS <AMIS@noreply.github.com>
Cc: Sciaky, Noah <noah_sciaky@med.unc.edu>; Author <author@noreply.github.com>
Subject: Re: [docking-org/AMIS] Refreshing Search after switching from Cleared to Histological Dataset (#14)
I have changed the unselected(sample type, gene, organ) dropdown's color to red. Please test it and if you think it is not enough for instruction, I will add some text under the dropdown fields.
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I have added the text instruction under the "not found" image. |
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Looks great, working well. |
"When switching to cleared the organ dropdown menu does not update and shows all histology available organs. When switching from cleared after browsing the images the organ dropdown list does not show all available organs. Can we push an auto refresh to this dropdown when changing Sample type?"
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