MetaBGC V2.0.0

===RELESE NOTES===

All R dependency has been removed. All Python now!
Added module Synthesize and FindTP modules.
Added Bioconda install steps and Docked container steps.
Users can test metabgc build with the toy dataset provided in https://github.com/donia-lab/MetaBGC#quick-start.

MetaBGC V1.3.7

===NEW FEATURES===

1. Faster HMMER search with better load balancing of the multiprocessing for large searches. Performance improved by over 60%.
2. Faster BLAST search with better load balancing of the multiprocessing for large searches. Performance improved by over 60%.

===BUG FIXES===

1. Fixed crash if TP genes are missing.
2. Fixed crash in metabgc build in some cases.

===RELESE NOTES===

1. Implementation of producer consumer paradigm for faster processing of large datasets may slow down runtime of toy data sets.

MetaBGC V1.3.6

===BUG FIXES===

1. Fixed BLAST search output format in metabgc analytics.
2. Fixed location of BLAST output.

MetaBGC V1.3.5

===FEATURE ADDITIONS===

1. Meaningful error messages and new log file metabgc.log. 
2. Added metabgc analytics module for internal Donia Lab runs. metabgc analytics --help 

===BUG FIXES===

1. Improved performance and fixes to special cases in metabgc build R script.
2. Added new and fixed some test cases.  

MetaBGC V1.3.3

Bug fixes and check pointed MetaBGC build process.

MetaBGC V1.3.2

RELEASE NOTES:

1. Added new output summary files with bin statistics and abundances.
2. Removed all R dependency from metabgc search steps i.e. from identify, quantify and cluster.
3. Added pytests for each metabgc search steps i.e. from identify, quantify and cluster.
4. Fixed bugs related to handling of common string delimiters in read names and filenames.

MetaBGC V1.3

RELEASE NOTES:

1. Added optional paths to HMM search or BLAST search results if done during pre-processing.
2. Fixed TP gene position interval algorithm.
3. Added pytests for the interval algorithm.

MetaBGC V1.2

RELEASE NOTES:

1. Click command line interface to run each module such as "metabgc build", "metabgc search" etc.
2. Build setup for distribution.
3. Uploaded to PyPI, install using "pip install metabgc"
4. Bug Fixes

MetaBGC V1.1

===RELEASE NOTES===

1. Added multiprocessing for pre-processing of reads.
2. Added multiprocessing for BLAST searching.
3. Fixed repeated pre-processing of reads in Identify and Quantify.
4. Fixed printing of gene position file.

v1.0.0

preparing V1 release