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Bin scaffolds from a single metagenomic sample into population genomes.

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[This is deprecated software. I recommend using MetaBAT or one of the other fully developed binning methods.]

Distribution-based Binner (DBB)

Cluster scaffolds from a single metagenomic sample into population genomes using a distribution-based binning approach.

Install

The simplest way to install this package is through pip:

sudo pip install dbb

DBB relies on numpy, scipy, matplotlib, and pysam v0.7.x.

Cite

If you find this package useful, please cite this git repository (https://github.com/dparks1134/dbb)

Copyright

Copyright © 2015 Donovan Parks. See LICENSE for further details.

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Bin scaffolds from a single metagenomic sample into population genomes.

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