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skip tests when cucim is not available
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Signed-off-by: Wenqi Li <wenqil@nvidia.com>
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wyli committed Sep 22, 2021
1 parent ca3a094 commit a102ab7
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Showing 4 changed files with 7 additions and 3 deletions.
1 change: 1 addition & 0 deletions tests/test_cuimage_reader.py
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from monai.utils import optional_import

cucim, has_cucim = optional_import("cucim")
has_cucim = has_cucim and hasattr(cucim, "CuImage")
PILImage, has_pil = optional_import("PIL.Image")

FILE_URL = "http://openslide.cs.cmu.edu/download/openslide-testdata/Generic-TIFF/CMU-1.tiff"
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3 changes: 2 additions & 1 deletion tests/test_lesion_froc.py
Expand Up @@ -19,7 +19,8 @@
from monai.apps.pathology.metrics import LesionFROC
from monai.utils import optional_import

_, has_cucim = optional_import("cucim")
_cucim, has_cucim = optional_import("cucim")
has_cucim = has_cucim and hasattr(_cucim, "CuImage")
_, has_skimage = optional_import("skimage.measure")
_, has_sp = optional_import("scipy.ndimage")
PILImage, has_pil = optional_import("PIL.Image")
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3 changes: 2 additions & 1 deletion tests/test_patch_wsi_dataset.py
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from monai.apps.utils import download_url
from monai.utils import optional_import

_, has_cim = optional_import("cucim")
_cucim, has_cim = optional_import("cucim")
has_cim = has_cim and hasattr(_cucim, "CuImage")
_, has_osl = optional_import("openslide")

FILE_URL = "http://openslide.cs.cmu.edu/download/openslide-testdata/Generic-TIFF/CMU-1.tiff"
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3 changes: 2 additions & 1 deletion tests/test_smartcache_patch_wsi_dataset.py
Expand Up @@ -21,7 +21,8 @@
from monai.apps.utils import download_url
from monai.utils import optional_import

_, has_cim = optional_import("cucim")
_cucim, has_cim = optional_import("cucim")
has_cim = has_cim and hasattr(_cucim, "CuImage")

FILE_URL = "http://openslide.cs.cmu.edu/download/openslide-testdata/Generic-TIFF/CMU-1.tiff"
FILE_PATH = os.path.join(os.path.dirname(__file__), "testing_data", "temp_" + os.path.basename(FILE_URL))
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