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deprecate read10xVisium in favor of VisiumIO functions #59

deprecate read10xVisium in favor of VisiumIO functions

deprecate read10xVisium in favor of VisiumIO functions #59

Triggered via push June 21, 2024 09:29
Status Failure
Total duration 8m 35s
Artifacts 3

check-bioc.yml

on: push
Matrix: build-check
docker-build-and-push
0s
docker-build-and-push
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6 errors and 9 warnings
macOS-latest (4.4)
No such keg: /opt/homebrew/Cellar/r
macOS-latest (4.4)
R CMD check found WARNINGs
macOS-latest (4.4)
Process completed with exit code 1.
ubuntu-latest (4.4)
Process completed with exit code 1.
windows-latest (4.4)
R CMD check found WARNINGs
windows-latest (4.4)
Process completed with exit code 1.
macOS-latest (4.4)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
macOS-latest (4.4)
pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config
macOS-latest (4.4)
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
macOS-latest (4.4)
Missing link or links in Rd file 'SpatialExperiment.Rd':
macOS-latest (4.4)
harfbuzz 8.5.0 is already installed and up-to-date. To reinstall 8.5.0, run: brew reinstall harfbuzz
macOS-latest (4.4)
macOS's Gatekeeper has been disabled for this Cask
ubuntu-latest (4.4)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
windows-latest (4.4)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/cache@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
windows-latest (4.4)
Missing link or links in Rd file 'SpatialExperiment.Rd':

Artifacts

Produced during runtime
Name Size
Linux-biocversion-RELEASE_3_19-r-4.4-results
26.7 MB
Windows-biocversion-RELEASE_3_19-r-4.4-results
27 MB
macOS-biocversion-RELEASE_3_19-r-4.4-results
28.3 MB