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Updated develop-ref after #2272 #2284

Merged
merged 403 commits into from
Sep 28, 2022
Merged

Updated develop-ref after #2272 #2284

merged 403 commits into from
Sep 28, 2022

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JohnHalleyGotway
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Expected Differences

Updating develop-ref after PR #2272 for issue #2271 adds new Stat-Analysis output to the unit tests.

It added these 2 new output files:

stat_analysis_gs/CONFIG_GRID_STAT_agg_nbrctc_dump.stat
stat_analysis_gs/CONFIG_GRID_STAT_agg_nbrctc_out.stat

And it adds new output for several other Stat-Analysis jobs in that same run.

These expected differences can been see in this GHA run.

Updating develop-ref to get past these diffs.

Howard Soh and others added 30 commits February 18, 2022 20:57
#1824 ci-run-test Reset itype to 1 for regular CAPE
* found and made three changes replacing met_help@ucar.edu with the MetPlus gitub discussions page

* Update met/docs/Users_Guide/appendixA.rst

Thanks, a typo plus I am completely neutral as to the exact wording.

Co-authored-by: jprestop <jpresto@ucar.edu>

* Update met/src/libcode/vx_data2d_grib2/data2d_grib2.cc

Co-authored-by: jprestop <jpresto@ucar.edu>

* Update met/README

Co-authored-by: jprestop <jpresto@ucar.edu>

Co-authored-by: jprestop <jpresto@ucar.edu>
* Updated set_job_controls.sh to add a check for the skip all keyword

* Added a space to check keyword ci-skip-all

Co-authored-by: Julie Prestopnik <jpresto@seneca.rap.ucar.edu>
* Per #1918, store the ensemble_member_id string in the EnsVarInfo class so that we can use it later, if needed, when reading climatological data which may also make use of that string.

* Per #1918, update gen_ens_prod to set the MET_ENS_MEMBER_ID environment variable when reading climatology data if the ens_member_ids config option has been set and the normalizing relative to climatology has been requested.

* Per #1918, add log messages to read_climo.cc and gen_ens_prod.cc to clarify what data is being read from which climo data files.

* Added documentation on MET_ENS_MEMBER_ID usage in climo file name

* updated usage langauge

* Per #1918, adding gen_ens_prod unit test to demonstrate using ENS_MEMBER_ID to read climo data separately for each member.

* Per #1918, adding gen_ens_prod unit test to demonstrate using ENS_MEMBER_ID to read climo data separately for each member.

Co-authored-by: j-opatz <59586397+j-opatz@users.noreply.github.com>
…cking the length of config_file instead of out_file. This became obvious when running gen_ens_prod without the -out option. That run segfaulted because it tried to create an output file using an empty string. (#2087)
jprestop and others added 27 commits September 2, 2022 10:00
* Per #2198, adding Seth Linden and Dave Albo to the Author List

* Per #2198, updated Dave Albo to David Albo

* Per #2198, added three new authors based on submitted AMS abstract

* Per #2198, adding .zenodo.json file

* Per #2198, adding orcids for all based on Tatiana's suggestion

* Update .zenodo.json

Co-authored-by: johnhg <johnhg@ucar.edu>

* Update .zenodo.json

Co-authored-by: johnhg <johnhg@ucar.edu>

* Update .zenodo.json

Co-authored-by: johnhg <johnhg@ucar.edu>

Co-authored-by: johnhg <johnhg@ucar.edu>
* Per #2196, update for upgrade to Python 3.8.6

* Updated based on new structure of METbaseimage

* Changed MET_BASE_IMAGE references to MET_BASE_TAG; Added information to the README.md file

* Changed MET_BASE_IMAGE references to MET_BASE_TAG; Updated the version from v1.0 to v1.1

* Update internal/scripts/docker/README.md

Based on suggestion from John HG.

Co-authored-by: johnhg <johnhg@ucar.edu>

* Update internal/scripts/docker/README.md

Based on suggestion from John HG.

Co-authored-by: johnhg <johnhg@ucar.edu>

* Update internal/scripts/docker/README.md

Based on suggestion from John HG.

Co-authored-by: johnhg <johnhg@ucar.edu>

* Update internal/scripts/docker/README.md

Based on suggestion from John HG.

Co-authored-by: johnhg <johnhg@ucar.edu>

* Per #2196, updating README.md based on suggestions from John HG

Co-authored-by: johnhg <johnhg@ucar.edu>
* creating chapter files

* putting a space in to work through the git add and commit process.

* Changed formatting of one header

Co-authored-by: Lisa Goodrich <lisag@seneca.rap.ucar.edu>
Co-authored-by: jprestop <jpresto@ucar.edu>
* Per issue #2206, for the ECNT line type, added CRPS_EMP_FAIR. SL

* Per issue #2206, for ECNT line type, added CRPS_EMP_FAIR. SL

* Per issue #2206, for ecnt_columns, added CRPS_EMP_FAIR. SL

* Per issue #2206, in write_ecnt_cols(), added crps_emp_fair. SL

* Per issue #2206, in ECNTInfo, added crps_emp_fair. SL

* Per issue #2206, started stubbing code pieced to calculate crps_emp_fair. SL

* Per issue #2206, added new function mean_abs_diff(). SL

* Per issue #2206, in compute_pair_vals() updated the code to calculate crps_emp and crps_emp_fair. SL

* Per issue #2206, added crps_emp_fair (CRPS_EMP_FAIR) to relevant code pieces. SL

* Per issue #2206, added wording for CRPS_EMP_FAIR, also added it to last column of ECNT line type. SL

* Per issue #2206, added info for CRPS_EMP_FAIR and also added the math equation for this. SL

* Per issue #2206, update the math equation for CRPS_EMP_FAIR. SL

* Per issue #2206, added new function weighted_mean_absolute_diff(). SL

* Per issue #2206, updated the crps_emp_fair calculation to subtract the weighted_mean_abs_diff. SL

* Per issue #2206, in aggr_orank_lines(), updated calculation for crps_emp_fair to use weighted_mean_abs_diff. SL

* Per issue #2206, renamed weighted_mean_abs_diff() to wmean_abs_diff(). SL

* Per issue #2206, for the crps_emp_fair calculation, changed weighted_mean_abs_diff() to wmean_abs_diff(). SL

* Per issue #2206, in aggr_orank_lines(), for the crps_emp_fair calculation, changed weighted_mean_abs_diff() to wmean_abs_diff(). SL

* Per issue #2206, updated the math equation for the CRPS_EMP_FAIR calculation. SL

* Per issue #2206, fixed a bug in the wmean_abs_diff() function. SL

* Per issue #2206, added code for crps_emp_fair. SL

* Per issue #2206, in set() function, added checks for crps_emp and crps_emp_fair, for values of 0.0. SL

Co-authored-by: Seth Linden <linden@seneca.rap.ucar.edu>
…r image that it used in the METplus automated tests
…elopment.docker file (apparently unused or rarely previously) to include changes for Python 3.8 including setting the LDFLAG to include -rpath to prevent needing LD_LIBRARY_PATH set to run the tools. Source the env file in the build MET docker script instead of setting the env vars in the configure command
…ck to 3.6. This is done by rolling back the base image in the MET Dockerfiles to dtcenter/met-base:v1.0. Using 3.8 caused the downstream METplus python embedding examples to fail via GHA in the METplus repo. Will write up an issue to investigate more during the MET-11.0.0-beta4 development cycle.
…BASE_IMAGE and MET_BASE_TAG since those variables are hard-coded in the Dockerfiles themselves and this script includes no logic to handle them.
… to MET_BASE_IMAGE and MET_BASE_TAG since those variables are hard-coded in the Dockerfiles themselves and this script includes no logic to handle them."

This reverts commit 5efc65e.
…should really revisit having this setting spread across so many locations.
Co-authored-by: Howard Soh <hsoh@seneca.rap.ucar.edu>
Co-authored-by: jprestop <jpresto@ucar.edu>
Co-authored-by: John Halley Gotway <johnhg@ucar.edu>
Co-authored-by: Howard Soh <hsoh@seneca.rap.ucar.edu>
Co-authored-by: John Halley Gotway <johnhg@ucar.edu>
Co-authored-by: Howard Soh <hsoh@seneca.rap.ucar.edu>
Co-authored-by: John Halley Gotway <johnhg@ucar.edu>
Co-authored-by: MET Tools Test Account <met_test@seneca.rap.ucar.edu>
Co-authored-by: Dave Albo <dave@seneca.rap.ucar.edu>
Co-authored-by: John Halley Gotway <johnhg@ucar.edu>
Co-authored-by: j-opatz <59586397+j-opatz@users.noreply.github.com>
… seneca changes the order of vx_grid semilatlon slightly. We probably manually editted that file instead of running bootstrap to regenerate it.
Co-authored-by: George McCabe <23407799+georgemccabe@users.noreply.github.com>
@JohnHalleyGotway JohnHalleyGotway added this to the MET 11.0.0 milestone Sep 28, 2022
@JohnHalleyGotway JohnHalleyGotway merged commit 59892e8 into develop-ref Sep 28, 2022
@JohnHalleyGotway JohnHalleyGotway mentioned this pull request Sep 28, 2022
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