Unable to install with newer version of MAST

[Keaty19]

Hi there,

I am currently trying to install the DWLS package, but keep getting the error:

Error: object 'zlm.SingleCellAssay' is not exported by 'namespace:MAST'

Because of the newer versions of MAST no longer containing the zlm.SingleCellAssay function ([https://bioconductor.org/packages/devel/bioc/manuals/MAST/man/MAST.pdf] page 34) and being replaced with zlm.

Is there a way of working around this? Or will it be a case of having to install an older version of MAST (v 0.931 for example). If so, do you know of any repositories which contain the old code?

Thank you!

Sam

[dtsoucas]

Should now be fixed with the latest updates! zlm.SingleCellAssay has been replaced with zlm. Thank you!

[annavpo]

Hello,

I am also trying to install the DWLS package with devtools::install_bitbucket("yuanlab/dwls")
and I get the same error as people have mentioned before:

Error: object 'zlm.SingleCellAssay' is not exported by 'namespace:MAST'

The "MAST version I use is '1.16.0'