Merge pull request #62 from jgors/master

add mod_ files for nibabel, nipy, nipype

duecredit/injections/mod_nibabel.py

@@ -0,0 +1,24 @@
+# emacs: -*- mode: python; py-indent-offset: 4; tab-width: 4; indent-tabs-mode: nil -*-
+# ex: set sts=4 ts=4 sw=4 noet:
+# ## ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ##
+#
+#   See COPYING file distributed along with the duecredit package for the
+#   copyright and license terms.
+#
+# ## ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ##
+"""Automatic injection of bibliography entries for nibabel module
+"""
+
+
+from ..entries import Url
+
+# If defined, would determine from which to which version of the corresponding
+# module to care about
+min_version = None
+max_version = None
+
+
+def inject(injector):
+    injector.add('nibabel', None, Url('http://nipy.org/nibabel'),
+                 description="Access a cacophony of neuro-imaging file formats", 
+                 tags=['implementation'])

duecredit/injections/mod_nipy.py

@@ -0,0 +1,23 @@
+# emacs: -*- mode: python; py-indent-offset: 4; tab-width: 4; indent-tabs-mode: nil -*-
+# ex: set sts=4 ts=4 sw=4 noet:
+# ## ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ##
+#
+#   See COPYING file distributed along with the duecredit package for the
+#   copyright and license terms.
+#
+# ## ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ### ##
+"""Automatic injection of bibliography entries for nipy module
+"""
+
+from ..entries import Doi
+
+# If defined, would determine from which to which version of the corresponding
+# module to care about
+min_version = None
+max_version = None
+
+
+def inject(injector):
+    injector.add('nipy', None, Doi('10.1016/S1053-8119(09)72223-2'),
+                 description="NIPY: an open library and development framework for FMRI data analysis",
+                 tags=['implementation'])

duecredit/injections/mod_nipype.py

@@ -36,11 +36,16 @@ def inject(injector):
                     description='FSL.',
                     tags=['implementation'])
 
-    #http://www.fil.ion.ucl.ac.uk/spm/
-    # not sure what primary spm citation is...couldn't find on website. 
-    #injector.add('nipype.interfaces', 'spm', Doi(''),
-                    #description='',
-                    #tags=['implementation'])
+    #http://www.fil.ion.ucl.ac.uk/spm
+    injector.add('nipype.interfaces', 'spm', BibTeX("""
+        @book{FrackowiakFristonFrithDolanMazziotta1997,
+            author={R.S.J. Frackowiak, K.J. Friston, C.D. Frith, R.J. Dolan, and J.C. Mazziotta},
+            title={Human Brain Function},
+            publisher={Academic Press USA}
+            year={1997},
+            }
+        """), description='The fundamental text on Statistical Parametric Mapping (SPM)',
+        tags=['implementation'])
 
     #http://surfer.nmr.mgh.harvard.edu/fswiki/FreeSurferMethodsCitation
     # there are a bunch, not sure what is primary

duecredit/tests/test_injections.py

@@ -166,6 +166,8 @@ def test_get_modules_for_injection():
         'mod_dipy',
         'mod_mdp',
         'mod_mne',
+        'mod_nibabel',
+        'mod_nipy',
         'mod_nipype',
         'mod_numpy',
         'mod_pandas',