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  • Colorado State University
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  1. Canine_Leukocyte_scRNA Canine_Leukocyte_scRNA Public

    This GitHub repository contains all the analysis code used in, "A single-cell RNA sequencing atlas of circulating leukocytes from healthy and osteosarcoma affected dogs."

    R 1

  2. canine_osteosarcoma_atlas canine_osteosarcoma_atlas Public

    This GitHub repository contains all the analysis code used in, "Single-cell RNA sequencing reveals the cellular and molecular heterogeneity of treatment-naïve primary osteosarcoma in dogs."

    Jupyter Notebook 2

  3. canine_duodenal_atlas canine_duodenal_atlas Public

    This GitHub repository contains all the analysis code used in, "Single cell transcriptomic analysis of the canine duodenum in chronic inflammatory enteropathy and health."

    R

  4. equine_synovialFluid_scRNA equine_synovialFluid_scRNA Public

    This GitHub repository contains all the analysis code used in, "Characterization of single cell transcriptomic responses to osteoarthritis in a naturally occurring equine model."

    R

  5. scrna-seq scrna-seq Public

    Installation instructions and usage of miscellaneous alignment protcols and advanced downstream analysis

    R 1

  6. r-env r-env Public

    Singularity container for R analysis