Merge pull request #332 from ludgerpaehler/master #1270
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name: Tests | |
on: [push, pull_request] | |
jobs: | |
Linting: | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set up Python | |
uses: actions/setup-python@v3 | |
with: | |
python-version: "3.9" | |
- name: Linting | |
run: | | |
pip install pre-commit | |
pre-commit run --all-files | |
Linux: | |
needs: Linting | |
runs-on: ubuntu-latest | |
strategy: | |
max-parallel: 4 | |
matrix: | |
python-version: ["3.8", "3.10"] | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v3 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Install dependencies | |
run: | | |
pip install --upgrade pip | |
pip install .[dev,miosr,cvxpy] | |
- name: Build the docs | |
# Not exactly how RTD does it, but close. | |
run: | | |
sudo apt-get update -y | |
sudo apt-get install pandoc | |
pip install .[docs] | |
cd docs | |
python -m sphinx -T -E -W -b html -d _build/doctrees . _build/html | |
cd .. | |
- name: Test with pytest | |
run: | | |
pytest test --cov=pysindy --cov-report=xml | |
- name: Upload coverage to Codecov | |
uses: codecov/codecov-action@v3 | |
with: | |
token: ${{ secrets.CODECOV_TOKEN }} | |
file: ./coverage.xml | |
- name: Execute feature notebook with papermill | |
run: | | |
pip install papermill | |
cd examples | |
papermill --report-mode 1_feature_overview.ipynb out.json | |
- uses: actions/cache@v3 | |
with: | |
path: ~/.cache/pip | |
key: ${{ runner.os }}-pip-${{ hashFiles('**/requirements-dev.txt') }} | |
restore-keys: | | |
${{ runner.os }}-pip- |