Use the stripped down docker images to allow us to have PWD buttons #3
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- Clean out tarballs + obsolete packages - add a new Dockerfile that does not use the mkl performance extensions
- Specify a version for mongodb instead of using "latest" - change the way the notebook dockerfile is built since juypter is not included in the default server docker image - add a new "small" dockerfile and docker-compose to make it easier to deploy the notebook server on pwd
- Add information on the `nomkl` tag - Add instructions for building the additional images - Add PWD buttons and instructions
This medium post https://medium.com/@patternrecognizer/how-to-add-a-try-in-play-with-docker-button-to-your-github-project-41cb65721e94 claimed that "Try in PWD" works with the `build` tag as well - e.g. ``` services: redis-commander: build: https://github.com/joeferner/redis-commander.git ``` and cites https://stackoverflow.com/questions/34120504/how-can-i-make-docker-compose-build-an-image-from-a-remote-git-repository/34120804#34120804 However, this only works for `docker-compose`. And as we can see from the pwd code https://github.com/play-with-docker/play-with-docker/blob/3bfb09802a6b41ad98adfee79535f813323b90a9/pwd/session.go#L183, it uses `docker stack deploy` to deploy. And `docker stack deploy` does not support the `build` tag https://stackoverflow.com/questions/41472219/docker-usage-in-compose-swarm-mode - it only works with published images. So this change: - adds instructions to build the notebook using the `nomkl` server image as the base - changes the `docker-compose-small` file to use the pre-built image instead of rebuilding
This is actually pretty much a pain. I either have to configure the password or they need to support non `-d` or something. But if we support this, we may as well document it
…-docker into some_niceties
shankari
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Jun 4, 2020
One line fix. This fixes e-mission/e-mission-docs#543 This has also been pushed to dockerhub as version 2.8.2 https://hub.docker.com/layers/emission/e-mission-server.dev.server-only/2.8.2/images/sha256-1f5ef249e90fbb5b1a5dbfdb0e12ee7b5e8f2bf9d837d1c3e70d63c58373ca30?context=repo ``` C02KT61MFFT0:em-server shankari$ docker-compose -f docker-compose.dev.yml up WARNING: Some services (db, web-server) use the 'deploy' key, which will be ignored. Compose does not support 'deploy' configuration - use `docker stack deploy` to deploy to a swarm. WARNING: The Docker Engine you're using is running in swarm mode. Compose does not use swarm mode to deploy services to multiple nodes in a swarm. All containers will be scheduled on the current node. To deploy your application across the swarm, use `docker stack deploy`. Creating em-server_db_1 ... done Creating em-server_web-server_1 ... done Attaching to em-server_db_1, em-server_web-server_1 web-server_1 | Cloning from repo https://github.com/e-mission/e-mission-server.git and branch master db_1 | 2020-06-04T05:47:50.254+0000 I CONTROL [initandlisten] MongoDB starting : pid=1 port=27017 dbpath=/data/db 64-bit host=5bb3a71c1d34 db_1 | 2020-06-04T05:47:50.256+0000 I CONTROL [initandlisten] db version v3.4.19 db_1 | 2020-06-04T05:47:50.257+0000 I CONTROL [initandlisten] git version: a2d97db8fe449d15eb8e275bbf318491781472bf ... web-server_1 | Installing manually downloaded packages web-server_1 | Downloading and Extracting Packages web-server_1 | Preparing transaction: ...working... done web-server_1 | Verifying transaction: ...working... done web-server_1 | Executing transaction: ...working... done web-server_1 | web-server_1 | Updating using conda now web-server_1 | Solving environment: ...working... done web-server_1 | ... web-server_1 | /src/e-mission-server web-server_1 | db web-server_1 | { web-server_1 | "timeseries": { web-server_1 | "url": "db" web-server_1 | } web-server_1 | } web-server_1 | 0.0.0.0 web-server_1 | { web-server_1 | "paths" : { web-server_1 | "static_path" : "webapp/www/", web-server_1 | "python_path" : "main", web-server_1 | "log_base_dir" : ".", web-server_1 | "log_file" : "debug.log" web-server_1 | }, web-server_1 | "__comment" : "Fill this in for the production server. port will almost certainly be 80 or 443. For iOS, using 0.0.0.0 allows you to test without an internet connection. For AWS and android, make sure that the host 0.0.0.0, localhost does not seem to work", web-server_1 | "server" : { web-server_1 | "host" : "0.0.0.0", web-server_1 | "port" : "8080", web-server_1 | "__comment": "1 hour = 60 min = 60 * 60 sec", web-server_1 | "timeout" : "3600", web-server_1 | "auth": "skip" web-server_1 | } web-server_1 | } web-server_1 | Enabling bottle live reload web-server_1 | Replacing run.host=server_host -> run(reloader=True,host=server_host db_1 | 2020-06-04T06:00:16.996+0000 I NETWORK [thread1] connection accepted from 172.19.0.3:44572 e-mission#1 (1 connection now open) db_1 | 2020-06-04T06:00:17.049+0000 I NETWORK [conn1] received client metadata from 172.19.0.3:44572 conn1: { driver: { name: "PyMongo", version: "3.5.1" }, os: { type: "Linux", name: "Linux", architecture: "x86_64", version: "4.19.76-linuxkit" }, platform: "CPython 3.6.1.final.0" } db_1 | 2020-06-04T06:00:18.188+0000 I NETWORK [thread1] connection accepted from 172.19.0.3:44574 e-mission#2 (2 connections now open) db_1 | 2020-06-04T06:00:18.189+0000 I NETWORK [conn2] received client metadata from 172.19.0.3:44574 conn2: { driver: { name: "PyMongo", version: "3.5.1" }, os: { type: "Linux", name: "Linux", architecture: "x86_64", version: "4.19.76-linuxkit" }, platform: "CPython 3.6.1.final.0" } web-server_1 | ERROR:root:habitica not configured, game functions not supported web-server_1 | Traceback (most recent call last): web-server_1 | File "/src/e-mission-server/emission/net/ext_service/habitica/proxy.py", line 22, in <module> web-server_1 | key_file = open('conf/net/ext_service/habitica.json') web-server_1 | FileNotFoundError: [Errno 2] No such file or directory: 'conf/net/ext_service/habitica.json' db_1 | 2020-06-04T06:00:19.162+0000 I NETWORK [thread1] connection accepted from 172.19.0.3:44576 e-mission#3 (3 connections now open) db_1 | 2020-06-04T06:00:19.168+0000 I NETWORK [conn3] received client metadata from 172.19.0.3:44576 conn3: { driver: { name: "PyMongo", version: "3.5.1" }, os: { type: "Linux", name: "Linux", architecture: "x86_64", version: "4.19.76-linuxkit" }, platform: "CPython 3.6.1.final.0" } db_1 | 2020-06-04T06:00:19.708+0000 I NETWORK [thread1] connection accepted from 172.19.0.3:44578 e-mission#4 (4 connections now open) db_1 | 2020-06-04T06:00:19.710+0000 I NETWORK [conn4] received client metadata from 172.19.0.3:44578 conn4: { driver: { name: "PyMongo", version: "3.5.1" }, os: { type: "Linux", name: "Linux", architecture: "x86_64", version: "4.19.76-linuxkit" }, platform: "CPython 3.6.1.final.0" } web-server_1 | ERROR:root:habitica not configured, game functions not supported web-server_1 | Traceback (most recent call last): web-server_1 | File "/src/e-mission-server/emission/net/ext_service/habitica/proxy.py", line 22, in <module> web-server_1 | key_file = open('conf/net/ext_service/habitica.json') web-server_1 | FileNotFoundError: [Errno 2] No such file or directory: 'conf/net/ext_service/habitica.json' ```
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Let's see if this helps people get over challenges with using e-mission!