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{bio}[foss-2020b] Biopython bumped to 1.79 and foss-2021a #13574

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sassy-crick
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(created using eb --new-pr)

@Micket Micket added the update label Aug 3, 2021
@sassy-crick sassy-crick changed the title Biopython bumped to 1.78 and foss-2020b, needed for alphafold {bio}[foss-2020b] Biopython bumped to 1.78 and foss-2020b, needed for alphafold Aug 3, 2021
@SebastianAchilles
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Test report by @SebastianAchilles
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
rocky8-eb - Linux rocky linux 8.4, x86_64, Intel(R) Core(TM) i7-6900K CPU @ 3.20GHz (broadwell), Python 3.6.8
See https://gist.github.com/ad65379543de8d261d57fc8c510c4f1a for a full test report.

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@boegelbot please test @ generoso

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@SebastianAchilles: Request for testing this PR well received on generoso

PR test command 'EB_PR=13574 EB_ARGS= /apps/slurm/default/bin/sbatch --job-name test_PR_13574 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 17935

Test results coming soon (I hope)...

- notification for comment with ID 894622138 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
generoso-c1-s-4 - Linux centos linux 8.2.2004, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/e170dd374c853fdd8d625bc2d2236172 for a full test report.

@sassy-crick sassy-crick changed the title {bio}[foss-2020b] Biopython bumped to 1.78 and foss-2020b, needed for alphafold {bio}[foss-2020b] Biopython bumped to 1.79 and foss-2021a Aug 9, 2021
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sassy-crick commented Aug 9, 2021

We already have that version, courtesy of @robert-mijakovic, so we don't need mine here. Closed.

@sassy-crick sassy-crick closed this Aug 9, 2021
@sassy-crick sassy-crick deleted the 20210803213232_new_pr_Biopython179 branch August 9, 2021 09:40
@boegel boegel added this to the 4.x milestone Aug 9, 2021
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5 participants