{bio}[GCC/11.2.0] CIRCexplorer2 v2.3.8, Pysam v0.18.0, TopHat v2.1.0, pybedtools 0.8.2 w/ Python 2.7.18

[ItIsI-Orient]

(created using eb --new-pr)

Required to pass tests:

• statically link Boost 1.75 in Cufflinks v20190706 installed with GCC/11.2.0, so Boost can be changed to build dependency #18843

[jfgrimm]

As decided in issue #16330, we have deprecated the use of True to signify a system-toolchain dependency (#16384), in favour of the more intuitive SYSTEM template constant. Due to the change in the test suite, please run eb --sync-pr-with-develop 16356 and update the PR to use SYSTEM instead.

[ItIsI-Orient]

Test report by @ItIsI-Orient
SUCCESS
Build succeeded for 3 out of 3 (3 easyconfigs in total)
node4002.donphan.os - Linux RHEL 8.6, x86_64, Intel(R) Xeon(R) Gold 6240 CPU @ 2.60GHz, 1 x NVIDIA NVIDIA A2, 530.30.02, Python 3.6.8
See https://gist.github.com/ItIsI-Orient/2484e39a60730de13e7c292fc71eded0 for a full test report.

[boegel]

@boegelbot please test @ generoso

[boegelbot]

@boegel: Request for testing this PR well received on login1

PR test command 'EB_PR=16356 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_16356 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

• exit code: 0
• output:

Submitted batch job 11776

Test results coming soon (I hope)...

- notification for comment with ID 1735597963 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

[boegelbot]

Test report by @boegelbot
SUCCESS
Build succeeded for 3 out of 3 (3 easyconfigs in total)
cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/48ddc023e27b05dc481f1a2ae8a07f7d for a full test report.

[boegel]

@boegelbot please test @ jsc-zen2

[boegelbot]

@boegel: Request for testing this PR well received on jsczen2l1.int.jsc-zen2.easybuild-test.cluster

PR test command 'EB_PR=16356 EB_ARGS= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --mem-per-cpu=4000M --job-name test_PR_16356 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

• exit code: 0
• output:

Submitted batch job 3428

Test results coming soon (I hope)...

- notification for comment with ID 1735717025 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

[boegelbot]

Test report by @boegelbot
FAILED
Build succeeded for 2 out of 4 (3 easyconfigs in total)
jsczen2c1.int.jsc-zen2.easybuild-test.cluster - Linux Rocky Linux 8.5, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/boegelbot/518a4e9bb9dc5b88b4365b3ea14f284b for a full test report.

[boegel]

Test report by @boegel
SUCCESS
Build succeeded for 3 out of 3 (3 easyconfigs in total)
node3157.skitty.os - Linux RHEL 8.6, x86_64, Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz (skylake_avx512), Python 3.6.8
See https://gist.github.com/boegel/db058840ac9c6656c0a72a8f3bf75ced for a full test report.

[boegel]

failed test report on jsc-zen2 is because of download problem for segemehl, which is being fixed in #18878

[boegel]

@boegelbot please test @ jsc-zen2

[boegelbot]

@boegel: Request for testing this PR well received on jsczen2l1.int.jsc-zen2.easybuild-test.cluster

PR test command 'EB_PR=16356 EB_ARGS= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --mem-per-cpu=4000M --job-name test_PR_16356 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

• exit code: 0
• output:

Submitted batch job 3445

Test results coming soon (I hope)...

- notification for comment with ID 1739029396 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

[boegelbot]

Test report by @boegelbot
SUCCESS
Build succeeded for 3 out of 3 (3 easyconfigs in total)
jsczen2c1.int.jsc-zen2.easybuild-test.cluster - Linux Rocky Linux 8.5, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/boegelbot/7ebcd8e5db0393d09734e2aaad698c4b for a full test report.

[boegel]

Test report by @boegel
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
node3157.skitty.os - Linux RHEL 8.6, x86_64, Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz (skylake_avx512), Python 3.6.8
See https://gist.github.com/boegel/9f1b492949ecc02ff975dabc7ac7a03a for a full test report.

[boegel]

Going in, thanks @ItIsI-Orient!