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{bio}[GCC/12.2.0] Mashtree v1.4.6, Mash v2.3, QuickTree v2.5 #19019

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verdurin
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(created using eb --new-pr)

@verdurin
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@boegelbot please test @ generoso

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@verdurin: Request for testing this PR well received on login1

PR test command 'EB_PR=19019 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_19019 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 11942

Test results coming soon (I hope)...

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it is of no use to you (unless you think I have a bug, which I don't).

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Test report by @boegelbot
SUCCESS
Build succeeded for 3 out of 3 (3 easyconfigs in total)
cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/7ba9c4b7830c608bcbc8a367d8c6d1c3 for a full test report.

@verdurin
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@boegelbot please test @ jsc-zen2

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@verdurin: Request for testing this PR well received on jsczen2l1.int.jsc-zen2.easybuild-test.cluster

PR test command 'EB_PR=19019 EB_ARGS= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --mem-per-cpu=4000M --job-name test_PR_19019 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 3558

Test results coming soon (I hope)...

- notification for comment with ID 1764837281 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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Test report by @boegelbot
FAILED
Build succeeded for 2 out of 3 (3 easyconfigs in total)
jsczen2c1.int.jsc-zen2.easybuild-test.cluster - Linux Rocky Linux 8.5, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/boegelbot/5801fae61090c26c5c50d79a85606a7e for a full test report.

@migueldiascosta
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@verdurin looks like the missing wget on jsc-zen2 revealed that Mashtree is fecthing https://github.com/lskatz/ROSS (https://github.com/lskatz/mashtree/blob/v1.4.0/Makefile.PL#L25, although this has since been removed, lskatz/mashtree@9e31a5d ...)

@verdurin verdurin changed the title {bio}[GCC/12.2.0] Mashtree v1.4.0, Mash v2.3, QuickTree v2.5 {bio}[GCC/12.2.0] Mashtree v1.4.6, Mash v2.3, QuickTree v2.5 Oct 24, 2023
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@boegelbot please test @ jsc-zen2

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Test report by @verdurin
SUCCESS
Build succeeded for 3 out of 3 (3 easyconfigs in total)
easybuild-c7.novalocal - Linux CentOS Linux 7.9.2009, x86_64, Intel Xeon Processor (Skylake, IBRS), Python 3.6.8
See https://gist.github.com/verdurin/c76bbd4cf21f6775538e7548ca6a0028 for a full test report.

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@verdurin: Request for testing this PR well received on jsczen2l1.int.jsc-zen2.easybuild-test.cluster

PR test command 'EB_PR=19019 EB_ARGS= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --mem-per-cpu=4000M --job-name test_PR_19019 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 3632

Test results coming soon (I hope)...

- notification for comment with ID 1778073968 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

@boegelbot
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Test report by @boegelbot
SUCCESS
Build succeeded for 3 out of 3 (3 easyconfigs in total)
jsczen2c1.int.jsc-zen2.easybuild-test.cluster - Linux Rocky Linux 8.5, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/boegelbot/4cd9100992c08cfefbbd3fd423d60882 for a full test report.

@verdurin
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@boegelbot please test @ generoso

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@verdurin: Request for testing this PR well received on login1

PR test command 'EB_PR=19019 EB_ARGS= EB_CONTAINER= EB_REPO=easybuild-easyconfigs /opt/software/slurm/bin/sbatch --job-name test_PR_19019 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 12048

Test results coming soon (I hope)...

- notification for comment with ID 1778084522 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

@boegelbot
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Test report by @boegelbot
SUCCESS
Build succeeded for 3 out of 3 (3 easyconfigs in total)
cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/2bda4d8f3eda88850503af103bf24b37 for a full test report.

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lgtm

@migueldiascosta migueldiascosta added this to the next release (4.8.2?) milestone Oct 25, 2023
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Going in, thanks @verdurin!

@migueldiascosta migueldiascosta merged commit e93e0e4 into easybuilders:develop Oct 25, 2023
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3 participants