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Modeller-9.13 easyconfig #825
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Modeller-9.13 easyconfig
pescobar be2d506
fix Modeller easyconfig after tweaks to easyblock
boegel 0e0ac1d
Merge pull request #8 from boegel/modeller
pescobar 4a5bd6e
use existing 'key' easyconfig parameter
boegel 7e4324f
Merge pull request #9 from boegel/modeller
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39 changes: 39 additions & 0 deletions
39
easybuild/easyconfigs/m/Modeller/Modeller-9.13-Python-2.7.5.eb
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# This file is an EasyBuild reciPY as per https://github.com/hpcugent/easybuild | ||
# Author: Pablo Escobar Lopez | ||
# Swiss Institute of Bioinformatics | ||
# Biozentrum - University of Basel | ||
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name = 'Modeller' | ||
version = '9.13' | ||
versionsuffix = '-Python-2.7.5' | ||
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homepage = 'http://salilab.org/modeller/' | ||
description = """ MODELLER is used for homology or comparative modeling of protein | ||
three-dimensional structures (1,2). The user provides an alignment of a sequence to | ||
be modeled with known related structures and MODELLER automatically calculates | ||
a model containing all non-hydrogen atoms.""" | ||
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# Modeller uses a binary installer running ./Install | ||
toolchain = {'name': 'dummy', 'version': 'dummy'} | ||
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source_urls = ['http://salilab.org/modeller/%(version)s/'] | ||
sources = [SOURCELOWER_TAR_GZ] | ||
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dependencies = [('Python', '2.7.5-goolf-1.4.10', '', True)] | ||
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LICENSEKEY = 'AAABBBCCCDDD' | ||
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sanity_check_paths = { | ||
'files': ["bin/mod%(version)s", "bin/modpy.sh", "bin/modslave.py"], | ||
'dirs': ["doc", "lib", "examples"] | ||
} | ||
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. this should go in the easyblock |
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# PYTHONPATH is for python 2.5, 2.6 or 2.7 | ||
# LD_LIBRARY_PATH is for x86_64 | ||
modextrapaths = { | ||
'PYTHONPATH': 'lib/x86_64-intel8/python2.5', | ||
'LD_LIBRARY_PATH': 'lib/x86_64-intel8' | ||
} | ||
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. in the easyblock please? |
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moduleclass = 'bio' | ||
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hmm, I don't think there a good way to define this one here, but it should be very clear it's a dummy value, e.g.: