Fix bug in CRISPRessoCompare where sample names were not properly set

This was a place where it was (partially) missed during the crispresso2_info object refactoring.
edilytics · Jan 11, 2022 · 3b3a741 · 3b3a741
1 parent e999079
commit 3b3a741
Showing 1 changed file with 2 additions and 3 deletions.
diff --git a/CRISPResso2/CRISPRessoCompareCORE.py b/CRISPResso2/CRISPRessoCompareCORE.py
@@ -108,16 +108,15 @@ def main():
         sample_1_name = args.sample_1_name
         if args.sample_1_name is None:
             sample_1_name = "Sample 1"
-            if 'name' in run_info_1 and run_info_1['running_info']['name'] != '':
+            if 'running_info' in run_info_1 and 'name' in run_info_1['running_info'] and run_info_1['running_info']['name']:
                 sample_1_name = run_info_1['running_info']['name']
 
         sample_2_name = args.sample_2_name
         if args.sample_2_name is None:
             sample_2_name = "Sample 2"
-            if 'name' in run_info_2 and run_info_2['running_info']['name'] != '':
+            if 'running_info' in run_info_2 and 'name' in run_info_2['running_info'] and run_info_2['running_info']['name']:
                 sample_2_name = run_info_2['running_info']['name']
 
-
         get_name_from_folder=lambda x: os.path.basename(os.path.abspath(x)).replace('CRISPResso_on_', '')
 
         if not args.name: