Bump CRISPResso version in Dockerfile and download release from Github

edilytics · Sep 2, 2021 · ed8ea68 · ed8ea68
1 parent 396a7f5
commit ed8ea68
Showing 1 changed file with 4 additions and 5 deletions.
diff --git a/Dockerfile b/Dockerfile
@@ -67,12 +67,11 @@ RUN micromamba install -y -n base \
     mod_wsgi-express module-config > /etc/apache2/mods-available/wsgi.load
 
 # Install CRISPResso
-ARG crispresso_version='2.1.0'
+ARG crispresso_version='2.2.2'
 WORKDIR /tmp/CRISPResso2
-# RUN wget https://github.com/pinellolab/CRISPResso2/archive/v${crispresso_version}.zip \
-  # && unzip v${crispresso_version}.zip \
-COPY ./CRISPResso2 /tmp/CRISPResso2
-RUN cd /tmp/CRISPResso2/ && \
+RUN wget https://github.com/pinellolab/CRISPResso2/archive/v${crispresso_version}.zip \
+  && unzip v${crispresso_version}.zip
+RUN cd /tmp/CRISPResso2/CRISPResso2-${crispresso_version} && \
     python setup.py install && \
     CRISPResso -h && \
     rm -rf /tmp/CRISPResso2