Feature/cdr 1007 cleanup security context #1159
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vidi42
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micha1970
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HolgerReiseVSys
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* Adjustments IdentifiedPath.from renamed to root * add logs * fix isUpdate (#36) * Update SDK to 2.2.0-SNAPSHOT * Feature/spring boot 3 (#33) * migrate to sporing boot 3 * test * test * test * test * test * test * downgrade jbx implementation * Feature/cdr 1037 spring boot3 (#1174) * migrate to sporing boot 3 * downgrade jbx implementation * disable auth * update auth * exclude commons-logging * match trailing slash * update basic auth * code cleanup * fix: trigger CircleCI * fix: trigger CircleCI * update changelog * code cleanup --------- Co-authored-by: vladislavploaia <vladislav.ploaia.ext@vitagroup.ag> (cherry picked from commit 5842be7) * Add dependabot support for github-actions (#39) * Feature/update actions (#43) * Bump actions/checkout from 3 to 4 Bumps [actions/checkout](https://github.com/actions/checkout) from 3 to 4. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](actions/checkout@v3...v4) --- updated-dependencies: - dependency-name: actions/checkout dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> * Bump joonvena/robotframework-reporter-action from 2.2 to 2.3 Bumps [joonvena/robotframework-reporter-action](https://github.com/joonvena/robotframework-reporter-action) from 2.2 to 2.3. - [Release notes](https://github.com/joonvena/robotframework-reporter-action/releases) - [Commits](joonvena/robotframework-reporter-action@v2.2...v2.3) --- updated-dependencies: - dependency-name: joonvena/robotframework-reporter-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> --------- Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Merge candidate (#40) * CDR-934 Adjust PathAnalysis for AqlObjectPath * Cleanup: renamed QueryService etc. * CDR-882 prepare for analyzing EHR_STATUS & FOLDER * Cleanup * CDR-882 fix aql path in exceptions * CDR-933 add template id column * CDR-933 Add template id to queryable columns * Formatting * CDR-933 Query extracted column for template id * CDR-933 fix some issue * CDR-933 Fix != for template id * CDR-891 avoid class in init cycle * Adjustments IdentifiedPath.from renamed to root * CDR-929 support abstract types in from * Fix template cache tenant association bug * Set yb_bnl_batch_size for ehrbase database * Set ehrbase.current_tenant as Number, not String * PathAnalysis WIP * CDR-929 Add template_id to query supported test * CDR-968 PathAnalysis WIP * CDR-968 Extracted PathCoherenceAnalysis, TreeNode * CDR-968 WIP PathCoherenceAnalysis * CDR-968 WIP PathCoherenceAnalysis * CDR-968 PathCoherenceAnalysis: finished handling of root predicates * CDR-968 introduced childOrder for TreeUtil::renderTree * CDR-968 typo PathCohesionAnalysis * CDR-968 PathCohesionAnalysis tests + cleanup * CDR-929 support AND in CONTAINS (incl. minor prep for OR) * CDR-929 Fix EHR root qubquery * CDR-929 Fix select field for ehr_id/value * CDR-999 WIP: CONTAINS with OR * CDR-999 Fix contains chain building with EHR root * CDR-1016 Add order by for extracted columns + formatting * CDR-1016 Fix NPE * Update SDK to 2.2.0-SNAPSHOT * CDR-1016 exclude template id from ORDER BY * CDR-999 Use subqueries for complex OR operands in contains * Adjust condition that prevented index usage * Set LOCALE for DB in setup script --------- Co-authored-by: Holger Reise <holger.reise@vitagroup.ag> Co-authored-by: vinzenz.mueller <vinzenz.mueller@vitagroup.ag> * Update OpenehrDirectoryController.java * Merge candidate (#50) * add remove cascade for sys tenant foreign keys * Bump jooq.version from 3.18.4 to 3.18.5 (#1143) Bumps `jooq.version` from 3.18.4 to 3.18.5. Updates `jooq` from 3.18.4 to 3.18.5 Updates `jooq-codegen-maven` from 3.18.4 to 3.18.5 --- updated-dependencies: - dependency-name: org.jooq:jooq dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.jooq:jooq-codegen-maven dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump spring-boot.version from 2.7.12 to 2.7.13 (#1144) Bumps `spring-boot.version` from 2.7.12 to 2.7.13. Updates `spring-boot-dependencies` from 2.7.12 to 2.7.13 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.12...v2.7.13) Updates `spring-boot-starter-logging` from 2.7.12 to 2.7.13 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.12...v2.7.13) Updates `spring-boot-maven-plugin` from 2.7.12 to 2.7.13 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.12...v2.7.13) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Add example scope to OpenEHR template example endpoint * CDR-934 move AqlPath * add tenant deletion * CDR-934 Adjust PathAnalysis for AqlObjectPath * update CHANGELOG.md * clean up * fix query & add stored query endpoint * fix query & add stored query endpoint * Bump micrometer-registry-prometheus from 1.11.1 to 1.11.2 (#1148) Bumps [micrometer-registry-prometheus](https://github.com/micrometer-metrics/micrometer) from 1.11.1 to 1.11.2. - [Release notes](https://github.com/micrometer-metrics/micrometer/releases) - [Commits](micrometer-metrics/micrometer@v1.11.1...v1.11.2) --- updated-dependencies: - dependency-name: io.micrometer:micrometer-registry-prometheus dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * cleanup & refactoring * cleanup * Cleanup: renamed QueryService etc. * CDR-882 prepare for analyzing EHR_STATUS & FOLDER * Bump spring-boot.version from 2.7.13 to 2.7.14 (#1154) Bumps `spring-boot.version` from 2.7.13 to 2.7.14. Updates `org.springframework.boot:spring-boot-dependencies` from 2.7.13 to 2.7.14 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.13...v2.7.14) Updates `org.springframework.boot:spring-boot-starter-logging` from 2.7.13 to 2.7.14 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.13...v2.7.14) Updates `org.springframework.boot:spring-boot-maven-plugin` from 2.7.13 to 2.7.14 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.13...v2.7.14) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * add audit directory (#1150) * add audit directory * audit delete directory * Cleanup * CDR-882 fix aql path in exceptions * Update release workflow to use java 17 * Use setup java v3 in the release workflow * Remove unnecessary setup java from release workflow * Don't skip tests for sdk dev build * release 0.28.0: updated version to 0.28.0 * updated version to 0.29.0-SNAPSHOT * CDR-933 add template id column * CDR-933 Add template id to queryable columns * Formatting * CDR-933 Query extracted column for template id * CDR-933 fix some issue * CDR-933 Fix != for template id * CDR-891 avoid class in init cycle * Adjustments IdentifiedPath.from renamed to root * CDR-929 support abstract types in from * Fix template cache tenant association bug * Set yb_bnl_batch_size for ehrbase database * Set ehrbase.current_tenant as Number, not String * PathAnalysis WIP * CDR-929 Add template_id to query supported test * CDR-968 PathAnalysis WIP * CDR-968 Extracted PathCoherenceAnalysis, TreeNode * CDR-968 WIP PathCoherenceAnalysis * CDR-968 WIP PathCoherenceAnalysis * CDR-968 PathCoherenceAnalysis: finished handling of root predicates * CDR-968 introduced childOrder for TreeUtil::renderTree * CDR-968 typo PathCohesionAnalysis * Feature/cdr 920 templates with same (#1158) * check if internal id works * fix & cleanup * cleanup * fix & cleanup * add tenant id comment * fix & cleanup * fix & cleanup * fix for non existing case * spotless * fix wrongly set parameter * fix & cleanup correct only for DefaultTenantAuthentication * Revert "fix & cleanup correct only for DefaultTenantAuthentication" This reverts commit 105cd60. * cleanup * CDR-968 PathCohesionAnalysis tests + cleanup * CDR-929 support AND in CONTAINS (incl. minor prep for OR) * CDR-929 Fix EHR root qubquery * CDR-929 Fix select field for ehr_id/value * Feature/cdr 1007 cleanup security context (#1159) * clean up security context * fix & cleanup correct only for DefaultTenantAuthentication * register an interceptor * add before filters & interceptor for auth-type when none * CDR-999 WIP: CONTAINS with OR * release 0.29.0: updated version to 0.29.0 * updated version to 0.30.0-SNAPSHOT * Bump org.apache.commons:commons-lang3 from 3.12.0 to 3.13.0 Bumps org.apache.commons:commons-lang3 from 3.12.0 to 3.13.0. --- updated-dependencies: - dependency-name: org.apache.commons:commons-lang3 dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> * fix the location * update CHANGELOG.md * XACML stuff * Add XACML auth for create ehr * Add XACML action and resource id * CDR-790 Add packaging as jar * Add tenant policy lookup to EHR Controller * Rebased on Dev * changed constraint name * Adapted to cdr-xaml-authorization-lib * Rebased on Dev * Remove libraries * Add missing import * Rename xacml url param for query controller * Change annotations order * Add AccessCtrlException handling * Add AccessCtrlException handling * Tmp. commit * Rebased on dev * Spotless * Tmp. commit * Revert "Tmp. commit" This reverts commit 5f070e4. * Removed all XACML/Security logic * Change mvn dependency * Changes XACML Impl. custom logic to handle the ehrbase external annotation which enforces xacml checks * cleanup * Rest endpoint instanciationis now surpressed by bean name * Review change * Update sonar orb to 2.0.0 * Bump jooq.version from 3.18.5 to 3.18.6 (#1162) Bumps `jooq.version` from 3.18.5 to 3.18.6. Updates `org.jooq:jooq` from 3.18.5 to 3.18.6 Updates `org.jooq:jooq-codegen-maven` from 3.18.5 to 3.18.6 --- updated-dependencies: - dependency-name: org.jooq:jooq dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.jooq:jooq-codegen-maven dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * CDR-999 Fix contains chain building with EHR root * CDR-941 Fix storing/reading attributes of Locatable.name (#1161) * CDR-941 Fix DvText.mappings and DvCodedText.defining_code.preferred_term not being stored for Locatable.name * Update CHANGELOG.md * Formatting * CDR-941 use snake case attribute names in /name to make them queryable via AQL * CDR-941 adjust test * CDR-941 Add migration script * add migration hint to updating.md * CDR-941 make migration optional + adjust UPDATING.md * CDR-1016 Add order by for extracted columns + formatting * CDR-1016 Fix NPE * Update SDK to 2.2.0-SNAPSHOT * CDR-1016 exclude template id from ORDER BY * CDR-999 Use subqueries for complex OR operands in contains * Bump net.bull.javamelody:javamelody-spring-boot-starter (#1156) Bumps [net.bull.javamelody:javamelody-spring-boot-starter](https://github.com/javamelody/javamelody) from 1.94.0 to 1.95.0. - [Release notes](https://github.com/javamelody/javamelody/releases) - [Changelog](https://github.com/javamelody/javamelody/blob/master/javamelody-release.cmd) - [Commits](javamelody/javamelody@javamelody-core-1.94.0...javamelody-core-1.95.0) --- updated-dependencies: - dependency-name: net.bull.javamelody:javamelody-spring-boot-starter dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * release 0.30.0: updated version to 0.30.0 * updated version to 0.31.0-SNAPSHOT * Bump io.micrometer:micrometer-registry-prometheus from 1.11.2 to 1.11.3 (#1167) Bumps [io.micrometer:micrometer-registry-prometheus](https://github.com/micrometer-metrics/micrometer) from 1.11.2 to 1.11.3. - [Release notes](https://github.com/micrometer-metrics/micrometer/releases) - [Commits](micrometer-metrics/micrometer@v1.11.2...v1.11.3) --- updated-dependencies: - dependency-name: io.micrometer:micrometer-registry-prometheus dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Adjust condition that prevented index usage * Remove commented security.authType * Add changelog documentation * Fixed changelog file for version 0.30.0 * Bump spring-boot.version from 2.7.14 to 2.7.15 (#1171) Bumps `spring-boot.version` from 2.7.14 to 2.7.15. Updates `org.springframework.boot:spring-boot-dependencies` from 2.7.14 to 2.7.15 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.14...v2.7.15) Updates `org.springframework.boot:spring-boot-starter-logging` from 2.7.14 to 2.7.15 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.14...v2.7.15) Updates `org.springframework.boot:spring-boot-maven-plugin` from 2.7.14 to 2.7.15 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.14...v2.7.15) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump org.apache.maven.plugins:maven-enforcer-plugin from 3.3.0 to 3.4.0 (#1170) Bumps [org.apache.maven.plugins:maven-enforcer-plugin](https://github.com/apache/maven-enforcer) from 3.3.0 to 3.4.0. - [Release notes](https://github.com/apache/maven-enforcer/releases) - [Commits](apache/maven-enforcer@enforcer-3.3.0...enforcer-3.4.0) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-enforcer-plugin dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Update GitHub actions to latest versions (#1172) * Update GitHub actions to latest versions * Add dependabot support for github-actions * Set LOCALE for DB in setup script * Update CHANGELOG.md Fix typo * Feature/cdr 1037 spring boot3 (#1174) * migrate to sporing boot 3 * downgrade jbx implementation * disable auth * update auth * exclude commons-logging * match trailing slash * update basic auth * code cleanup * fix: trigger CircleCI * fix: trigger CircleCI * update changelog * code cleanup --------- Co-authored-by: vladislavploaia <vladislav.ploaia.ext@vitagroup.ag> * add language as default (#1166) * Bump spring-boot.version from 3.1.1 to 3.1.3 (#1177) Bumps `spring-boot.version` from 3.1.1 to 3.1.3. Updates `org.springframework.boot:spring-boot-dependencies` from 3.1.1 to 3.1.3 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.1...v3.1.3) Updates `org.springframework.boot:spring-boot-starter-logging` from 3.1.1 to 3.1.3 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.1...v3.1.3) Updates `org.springframework.boot:spring-boot-maven-plugin` from 3.1.1 to 3.1.3 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.1...v3.1.3) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump org.apache.maven.plugins:maven-enforcer-plugin from 3.4.0 to 3.4.1 (#1178) Bumps [org.apache.maven.plugins:maven-enforcer-plugin](https://github.com/apache/maven-enforcer) from 3.4.0 to 3.4.1. - [Release notes](https://github.com/apache/maven-enforcer/releases) - [Commits](apache/maven-enforcer@enforcer-3.4.0...enforcer-3.4.1) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-enforcer-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump actions/checkout from 3 to 4 (#1176) Bumps [actions/checkout](https://github.com/actions/checkout) from 3 to 4. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](actions/checkout@v3...v4) --- updated-dependencies: - dependency-name: actions/checkout dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Enabled swagger ui working with Spring Boot 3 * Bump io.micrometer:micrometer-registry-prometheus from 1.11.3 to 1.11.4 (#1184) Bumps [io.micrometer:micrometer-registry-prometheus](https://github.com/micrometer-metrics/micrometer) from 1.11.3 to 1.11.4. - [Release notes](https://github.com/micrometer-metrics/micrometer/releases) - [Commits](micrometer-metrics/micrometer@v1.11.3...v1.11.4) --- updated-dependencies: - dependency-name: io.micrometer:micrometer-registry-prometheus dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/build-push-action from 4 to 5 (#1182) Bumps [docker/build-push-action](https://github.com/docker/build-push-action) from 4 to 5. - [Release notes](https://github.com/docker/build-push-action/releases) - [Commits](docker/build-push-action@v4...v5) --- updated-dependencies: - dependency-name: docker/build-push-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/setup-buildx-action from 2 to 3 (#1181) Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 2 to 3. - [Release notes](https://github.com/docker/setup-buildx-action/releases) - [Commits](docker/setup-buildx-action@v2...v3) --- updated-dependencies: - dependency-name: docker/setup-buildx-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/login-action from 2 to 3 (#1183) Bumps [docker/login-action](https://github.com/docker/login-action) from 2 to 3. - [Release notes](https://github.com/docker/login-action/releases) - [Commits](docker/login-action@v2...v3) --- updated-dependencies: - dependency-name: docker/login-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Add plugin path to sonar-project.properties (#1180) * Bump spring-boot.version from 3.1.3 to 3.1.4 (#1187) Bumps `spring-boot.version` from 3.1.3 to 3.1.4. Updates `org.springframework.boot:spring-boot-dependencies` from 3.1.3 to 3.1.4 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.3...v3.1.4) Updates `org.springframework.boot:spring-boot-starter-logging` from 3.1.3 to 3.1.4 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.3...v3.1.4) Updates `org.springframework.boot:spring-boot-maven-plugin` from 3.1.3 to 3.1.4 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.3...v3.1.4) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * code cleanup (#1188) * Feature/pmk 251 (#1190) * change github action * fix AqlRoutines * inline parmeters * remove unnecessary DSL.field * fix order by * fix func build * fix review * Revert "change github action" This reverts commit 90714d9. * Changelog for #1190 --------- Co-authored-by: Alex Vidrean <alex.vidrean@gmail.com> * release 0.31.0: updated version to 0.31.0 * updated version to 0.32.0-SNAPSHOT * try out Java 21 --------- Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: Dmitry Tulba <tulbad1@gmail.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: Alex Vidrean <alex.vidrean@gmail.com> Co-authored-by: vinzenz.mueller <vinzenz.mueller@vitagroup.ag> Co-authored-by: Holger Reise <holger.reise@vitagroup.ag> Co-authored-by: bot <bot@ehrbase.org> Co-authored-by: MBA <michael.baumann@vitagroup.ag> Co-authored-by: vmueller-vg <100680528+vmueller-vg@users.noreply.github.com> Co-authored-by: vladislavploaia <vladislav.ploaia.ext@vitagroup.ag> --------- Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: Holger Reise <holger.reise@vitagroup.ag> Co-authored-by: Dmitry Tulba <tulbad1@gmail.com> Co-authored-by: vinzenz.mueller <vinzenz.mueller@vitagroup.ag> Co-authored-by: Alex <alex.vidrean@gmail.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: bot <bot@ehrbase.org> Co-authored-by: MBA <michael.baumann@vitagroup.ag> Co-authored-by: vmueller-vg <100680528+vmueller-vg@users.noreply.github.com> Co-authored-by: vladislavploaia <vladislav.ploaia.ext@vitagroup.ag>
stefanspiska
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Jan 29, 2024
* add remove cascade for sys tenant foreign keys * Bump jooq.version from 3.18.4 to 3.18.5 (#1143) Bumps `jooq.version` from 3.18.4 to 3.18.5. Updates `jooq` from 3.18.4 to 3.18.5 Updates `jooq-codegen-maven` from 3.18.4 to 3.18.5 --- updated-dependencies: - dependency-name: org.jooq:jooq dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.jooq:jooq-codegen-maven dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump spring-boot.version from 2.7.12 to 2.7.13 (#1144) Bumps `spring-boot.version` from 2.7.12 to 2.7.13. Updates `spring-boot-dependencies` from 2.7.12 to 2.7.13 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.12...v2.7.13) Updates `spring-boot-starter-logging` from 2.7.12 to 2.7.13 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.12...v2.7.13) Updates `spring-boot-maven-plugin` from 2.7.12 to 2.7.13 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.12...v2.7.13) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Add example scope to OpenEHR template example endpoint * CDR-934 move AqlPath * add tenant deletion * CDR-934 Adjust PathAnalysis for AqlObjectPath * update CHANGELOG.md * clean up * fix query & add stored query endpoint * fix query & add stored query endpoint * Bump micrometer-registry-prometheus from 1.11.1 to 1.11.2 (#1148) Bumps [micrometer-registry-prometheus](https://github.com/micrometer-metrics/micrometer) from 1.11.1 to 1.11.2. - [Release notes](https://github.com/micrometer-metrics/micrometer/releases) - [Commits](micrometer-metrics/micrometer@v1.11.1...v1.11.2) --- updated-dependencies: - dependency-name: io.micrometer:micrometer-registry-prometheus dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * cleanup & refactoring * cleanup * Cleanup: renamed QueryService etc. * CDR-882 prepare for analyzing EHR_STATUS & FOLDER * Bump spring-boot.version from 2.7.13 to 2.7.14 (#1154) Bumps `spring-boot.version` from 2.7.13 to 2.7.14. Updates `org.springframework.boot:spring-boot-dependencies` from 2.7.13 to 2.7.14 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.13...v2.7.14) Updates `org.springframework.boot:spring-boot-starter-logging` from 2.7.13 to 2.7.14 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.13...v2.7.14) Updates `org.springframework.boot:spring-boot-maven-plugin` from 2.7.13 to 2.7.14 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.13...v2.7.14) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * add audit directory (#1150) * add audit directory * audit delete directory * Cleanup * CDR-882 fix aql path in exceptions * Update release workflow to use java 17 * Use setup java v3 in the release workflow * Remove unnecessary setup java from release workflow * Don't skip tests for sdk dev build * release 0.28.0: updated version to 0.28.0 * updated version to 0.29.0-SNAPSHOT * CDR-933 add template id column * CDR-933 Add template id to queryable columns * Formatting * CDR-933 Query extracted column for template id * CDR-933 fix some issue * CDR-933 Fix != for template id * CDR-891 avoid class in init cycle * Adjustments IdentifiedPath.from renamed to root * CDR-929 support abstract types in from * Fix template cache tenant association bug * Set yb_bnl_batch_size for ehrbase database * Set ehrbase.current_tenant as Number, not String * PathAnalysis WIP * CDR-929 Add template_id to query supported test * CDR-968 PathAnalysis WIP * CDR-968 Extracted PathCoherenceAnalysis, TreeNode * CDR-968 WIP PathCoherenceAnalysis * CDR-968 WIP PathCoherenceAnalysis * CDR-968 PathCoherenceAnalysis: finished handling of root predicates * CDR-968 introduced childOrder for TreeUtil::renderTree * CDR-968 typo PathCohesionAnalysis * Feature/cdr 920 templates with same (#1158) * check if internal id works * fix & cleanup * cleanup * fix & cleanup * add tenant id comment * fix & cleanup * fix & cleanup * fix for non existing case * spotless * fix wrongly set parameter * fix & cleanup correct only for DefaultTenantAuthentication * Revert "fix & cleanup correct only for DefaultTenantAuthentication" This reverts commit 105cd60. * cleanup * CDR-968 PathCohesionAnalysis tests + cleanup * CDR-929 support AND in CONTAINS (incl. minor prep for OR) * CDR-929 Fix EHR root qubquery * CDR-929 Fix select field for ehr_id/value * Feature/cdr 1007 cleanup security context (#1159) * clean up security context * fix & cleanup correct only for DefaultTenantAuthentication * register an interceptor * add before filters & interceptor for auth-type when none * CDR-999 WIP: CONTAINS with OR * release 0.29.0: updated version to 0.29.0 * updated version to 0.30.0-SNAPSHOT * Bump org.apache.commons:commons-lang3 from 3.12.0 to 3.13.0 Bumps org.apache.commons:commons-lang3 from 3.12.0 to 3.13.0. --- updated-dependencies: - dependency-name: org.apache.commons:commons-lang3 dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> * fix the location * update CHANGELOG.md * XACML stuff * Add XACML auth for create ehr * Add XACML action and resource id * CDR-790 Add packaging as jar * Add tenant policy lookup to EHR Controller * Rebased on Dev * changed constraint name * Adapted to cdr-xaml-authorization-lib * Rebased on Dev * Remove libraries * Add missing import * Rename xacml url param for query controller * Change annotations order * Add AccessCtrlException handling * Add AccessCtrlException handling * Tmp. commit * Rebased on dev * Spotless * Tmp. commit * Revert "Tmp. commit" This reverts commit 5f070e4. * Removed all XACML/Security logic * Change mvn dependency * Changes XACML Impl. custom logic to handle the ehrbase external annotation which enforces xacml checks * cleanup * Rest endpoint instanciationis now surpressed by bean name * Review change * Update sonar orb to 2.0.0 * Bump jooq.version from 3.18.5 to 3.18.6 (#1162) Bumps `jooq.version` from 3.18.5 to 3.18.6. Updates `org.jooq:jooq` from 3.18.5 to 3.18.6 Updates `org.jooq:jooq-codegen-maven` from 3.18.5 to 3.18.6 --- updated-dependencies: - dependency-name: org.jooq:jooq dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.jooq:jooq-codegen-maven dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * CDR-999 Fix contains chain building with EHR root * CDR-941 Fix storing/reading attributes of Locatable.name (#1161) * CDR-941 Fix DvText.mappings and DvCodedText.defining_code.preferred_term not being stored for Locatable.name * Update CHANGELOG.md * Formatting * CDR-941 use snake case attribute names in /name to make them queryable via AQL * CDR-941 adjust test * CDR-941 Add migration script * add migration hint to updating.md * CDR-941 make migration optional + adjust UPDATING.md * CDR-1016 Add order by for extracted columns + formatting * CDR-1016 Fix NPE * Update SDK to 2.2.0-SNAPSHOT * CDR-1016 exclude template id from ORDER BY * CDR-999 Use subqueries for complex OR operands in contains * Bump net.bull.javamelody:javamelody-spring-boot-starter (#1156) Bumps [net.bull.javamelody:javamelody-spring-boot-starter](https://github.com/javamelody/javamelody) from 1.94.0 to 1.95.0. - [Release notes](https://github.com/javamelody/javamelody/releases) - [Changelog](https://github.com/javamelody/javamelody/blob/master/javamelody-release.cmd) - [Commits](javamelody/javamelody@javamelody-core-1.94.0...javamelody-core-1.95.0) --- updated-dependencies: - dependency-name: net.bull.javamelody:javamelody-spring-boot-starter dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * release 0.30.0: updated version to 0.30.0 * updated version to 0.31.0-SNAPSHOT * Bump io.micrometer:micrometer-registry-prometheus from 1.11.2 to 1.11.3 (#1167) Bumps [io.micrometer:micrometer-registry-prometheus](https://github.com/micrometer-metrics/micrometer) from 1.11.2 to 1.11.3. - [Release notes](https://github.com/micrometer-metrics/micrometer/releases) - [Commits](micrometer-metrics/micrometer@v1.11.2...v1.11.3) --- updated-dependencies: - dependency-name: io.micrometer:micrometer-registry-prometheus dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Adjust condition that prevented index usage * Remove commented security.authType * Add changelog documentation * Fixed changelog file for version 0.30.0 * Bump spring-boot.version from 2.7.14 to 2.7.15 (#1171) Bumps `spring-boot.version` from 2.7.14 to 2.7.15. Updates `org.springframework.boot:spring-boot-dependencies` from 2.7.14 to 2.7.15 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.14...v2.7.15) Updates `org.springframework.boot:spring-boot-starter-logging` from 2.7.14 to 2.7.15 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.14...v2.7.15) Updates `org.springframework.boot:spring-boot-maven-plugin` from 2.7.14 to 2.7.15 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.14...v2.7.15) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump org.apache.maven.plugins:maven-enforcer-plugin from 3.3.0 to 3.4.0 (#1170) Bumps [org.apache.maven.plugins:maven-enforcer-plugin](https://github.com/apache/maven-enforcer) from 3.3.0 to 3.4.0. - [Release notes](https://github.com/apache/maven-enforcer/releases) - [Commits](apache/maven-enforcer@enforcer-3.3.0...enforcer-3.4.0) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-enforcer-plugin dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Update GitHub actions to latest versions (#1172) * Update GitHub actions to latest versions * Add dependabot support for github-actions * Set LOCALE for DB in setup script * Update CHANGELOG.md Fix typo * Feature/cdr 1037 spring boot3 (#1174) * migrate to sporing boot 3 * downgrade jbx implementation * disable auth * update auth * exclude commons-logging * match trailing slash * update basic auth * code cleanup * fix: trigger CircleCI * fix: trigger CircleCI * update changelog * code cleanup --------- Co-authored-by: vladislavploaia <vladislav.ploaia.ext@vitagroup.ag> * add language as default (#1166) * Bump spring-boot.version from 3.1.1 to 3.1.3 (#1177) Bumps `spring-boot.version` from 3.1.1 to 3.1.3. Updates `org.springframework.boot:spring-boot-dependencies` from 3.1.1 to 3.1.3 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.1...v3.1.3) Updates `org.springframework.boot:spring-boot-starter-logging` from 3.1.1 to 3.1.3 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.1...v3.1.3) Updates `org.springframework.boot:spring-boot-maven-plugin` from 3.1.1 to 3.1.3 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.1...v3.1.3) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump org.apache.maven.plugins:maven-enforcer-plugin from 3.4.0 to 3.4.1 (#1178) Bumps [org.apache.maven.plugins:maven-enforcer-plugin](https://github.com/apache/maven-enforcer) from 3.4.0 to 3.4.1. - [Release notes](https://github.com/apache/maven-enforcer/releases) - [Commits](apache/maven-enforcer@enforcer-3.4.0...enforcer-3.4.1) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-enforcer-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump actions/checkout from 3 to 4 (#1176) Bumps [actions/checkout](https://github.com/actions/checkout) from 3 to 4. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](actions/checkout@v3...v4) --- updated-dependencies: - dependency-name: actions/checkout dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Enabled swagger ui working with Spring Boot 3 * Bump io.micrometer:micrometer-registry-prometheus from 1.11.3 to 1.11.4 (#1184) Bumps [io.micrometer:micrometer-registry-prometheus](https://github.com/micrometer-metrics/micrometer) from 1.11.3 to 1.11.4. - [Release notes](https://github.com/micrometer-metrics/micrometer/releases) - [Commits](micrometer-metrics/micrometer@v1.11.3...v1.11.4) --- updated-dependencies: - dependency-name: io.micrometer:micrometer-registry-prometheus dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/build-push-action from 4 to 5 (#1182) Bumps [docker/build-push-action](https://github.com/docker/build-push-action) from 4 to 5. - [Release notes](https://github.com/docker/build-push-action/releases) - [Commits](docker/build-push-action@v4...v5) --- updated-dependencies: - dependency-name: docker/build-push-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/setup-buildx-action from 2 to 3 (#1181) Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 2 to 3. - [Release notes](https://github.com/docker/setup-buildx-action/releases) - [Commits](docker/setup-buildx-action@v2...v3) --- updated-dependencies: - dependency-name: docker/setup-buildx-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/login-action from 2 to 3 (#1183) Bumps [docker/login-action](https://github.com/docker/login-action) from 2 to 3. - [Release notes](https://github.com/docker/login-action/releases) - [Commits](docker/login-action@v2...v3) --- updated-dependencies: - dependency-name: docker/login-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Add plugin path to sonar-project.properties (#1180) * Bump spring-boot.version from 3.1.3 to 3.1.4 (#1187) Bumps `spring-boot.version` from 3.1.3 to 3.1.4. Updates `org.springframework.boot:spring-boot-dependencies` from 3.1.3 to 3.1.4 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.3...v3.1.4) Updates `org.springframework.boot:spring-boot-starter-logging` from 3.1.3 to 3.1.4 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.3...v3.1.4) Updates `org.springframework.boot:spring-boot-maven-plugin` from 3.1.3 to 3.1.4 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.3...v3.1.4) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * code cleanup (#1188) * Feature/pmk 251 (#1190) * change github action * fix AqlRoutines * inline parmeters * remove unnecessary DSL.field * fix order by * fix func build * fix review * Revert "change github action" This reverts commit 90714d9. * Changelog for #1190 --------- Co-authored-by: Alex Vidrean <alex.vidrean@gmail.com> * release 0.31.0: updated version to 0.31.0 * updated version to 0.32.0-SNAPSHOT * try out Java 21 --------- Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: Dmitry Tulba <tulbad1@gmail.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: Alex Vidrean <alex.vidrean@gmail.com> Co-authored-by: vinzenz.mueller <vinzenz.mueller@vitagroup.ag> Co-authored-by: Holger Reise <holger.reise@vitagroup.ag> Co-authored-by: bot <bot@ehrbase.org> Co-authored-by: MBA <michael.baumann@vitagroup.ag> Co-authored-by: vmueller-vg <100680528+vmueller-vg@users.noreply.github.com> Co-authored-by: vladislavploaia <vladislav.ploaia.ext@vitagroup.ag>
stefanspiska
added a commit
that referenced
this pull request
Jan 29, 2024
* Adjustments IdentifiedPath.from renamed to root * add logs * fix isUpdate (#36) * Update SDK to 2.2.0-SNAPSHOT * Feature/spring boot 3 (#33) * migrate to sporing boot 3 * test * test * test * test * test * test * downgrade jbx implementation * Feature/cdr 1037 spring boot3 (#1174) * migrate to sporing boot 3 * downgrade jbx implementation * disable auth * update auth * exclude commons-logging * match trailing slash * update basic auth * code cleanup * fix: trigger CircleCI * fix: trigger CircleCI * update changelog * code cleanup --------- Co-authored-by: vladislavploaia <vladislav.ploaia.ext@vitagroup.ag> (cherry picked from commit 5842be7) * Add dependabot support for github-actions (#39) * Feature/update actions (#43) * Bump actions/checkout from 3 to 4 Bumps [actions/checkout](https://github.com/actions/checkout) from 3 to 4. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](actions/checkout@v3...v4) --- updated-dependencies: - dependency-name: actions/checkout dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> * Bump joonvena/robotframework-reporter-action from 2.2 to 2.3 Bumps [joonvena/robotframework-reporter-action](https://github.com/joonvena/robotframework-reporter-action) from 2.2 to 2.3. - [Release notes](https://github.com/joonvena/robotframework-reporter-action/releases) - [Commits](joonvena/robotframework-reporter-action@v2.2...v2.3) --- updated-dependencies: - dependency-name: joonvena/robotframework-reporter-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> --------- Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Merge candidate (#40) * CDR-934 Adjust PathAnalysis for AqlObjectPath * Cleanup: renamed QueryService etc. * CDR-882 prepare for analyzing EHR_STATUS & FOLDER * Cleanup * CDR-882 fix aql path in exceptions * CDR-933 add template id column * CDR-933 Add template id to queryable columns * Formatting * CDR-933 Query extracted column for template id * CDR-933 fix some issue * CDR-933 Fix != for template id * CDR-891 avoid class in init cycle * Adjustments IdentifiedPath.from renamed to root * CDR-929 support abstract types in from * Fix template cache tenant association bug * Set yb_bnl_batch_size for ehrbase database * Set ehrbase.current_tenant as Number, not String * PathAnalysis WIP * CDR-929 Add template_id to query supported test * CDR-968 PathAnalysis WIP * CDR-968 Extracted PathCoherenceAnalysis, TreeNode * CDR-968 WIP PathCoherenceAnalysis * CDR-968 WIP PathCoherenceAnalysis * CDR-968 PathCoherenceAnalysis: finished handling of root predicates * CDR-968 introduced childOrder for TreeUtil::renderTree * CDR-968 typo PathCohesionAnalysis * CDR-968 PathCohesionAnalysis tests + cleanup * CDR-929 support AND in CONTAINS (incl. minor prep for OR) * CDR-929 Fix EHR root qubquery * CDR-929 Fix select field for ehr_id/value * CDR-999 WIP: CONTAINS with OR * CDR-999 Fix contains chain building with EHR root * CDR-1016 Add order by for extracted columns + formatting * CDR-1016 Fix NPE * Update SDK to 2.2.0-SNAPSHOT * CDR-1016 exclude template id from ORDER BY * CDR-999 Use subqueries for complex OR operands in contains * Adjust condition that prevented index usage * Set LOCALE for DB in setup script --------- Co-authored-by: Holger Reise <holger.reise@vitagroup.ag> Co-authored-by: vinzenz.mueller <vinzenz.mueller@vitagroup.ag> * Update OpenehrDirectoryController.java * Merge candidate (#50) * add remove cascade for sys tenant foreign keys * Bump jooq.version from 3.18.4 to 3.18.5 (#1143) Bumps `jooq.version` from 3.18.4 to 3.18.5. Updates `jooq` from 3.18.4 to 3.18.5 Updates `jooq-codegen-maven` from 3.18.4 to 3.18.5 --- updated-dependencies: - dependency-name: org.jooq:jooq dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.jooq:jooq-codegen-maven dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump spring-boot.version from 2.7.12 to 2.7.13 (#1144) Bumps `spring-boot.version` from 2.7.12 to 2.7.13. Updates `spring-boot-dependencies` from 2.7.12 to 2.7.13 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.12...v2.7.13) Updates `spring-boot-starter-logging` from 2.7.12 to 2.7.13 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.12...v2.7.13) Updates `spring-boot-maven-plugin` from 2.7.12 to 2.7.13 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.12...v2.7.13) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Add example scope to OpenEHR template example endpoint * CDR-934 move AqlPath * add tenant deletion * CDR-934 Adjust PathAnalysis for AqlObjectPath * update CHANGELOG.md * clean up * fix query & add stored query endpoint * fix query & add stored query endpoint * Bump micrometer-registry-prometheus from 1.11.1 to 1.11.2 (#1148) Bumps [micrometer-registry-prometheus](https://github.com/micrometer-metrics/micrometer) from 1.11.1 to 1.11.2. - [Release notes](https://github.com/micrometer-metrics/micrometer/releases) - [Commits](micrometer-metrics/micrometer@v1.11.1...v1.11.2) --- updated-dependencies: - dependency-name: io.micrometer:micrometer-registry-prometheus dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * cleanup & refactoring * cleanup * Cleanup: renamed QueryService etc. * CDR-882 prepare for analyzing EHR_STATUS & FOLDER * Bump spring-boot.version from 2.7.13 to 2.7.14 (#1154) Bumps `spring-boot.version` from 2.7.13 to 2.7.14. Updates `org.springframework.boot:spring-boot-dependencies` from 2.7.13 to 2.7.14 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.13...v2.7.14) Updates `org.springframework.boot:spring-boot-starter-logging` from 2.7.13 to 2.7.14 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.13...v2.7.14) Updates `org.springframework.boot:spring-boot-maven-plugin` from 2.7.13 to 2.7.14 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.13...v2.7.14) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * add audit directory (#1150) * add audit directory * audit delete directory * Cleanup * CDR-882 fix aql path in exceptions * Update release workflow to use java 17 * Use setup java v3 in the release workflow * Remove unnecessary setup java from release workflow * Don't skip tests for sdk dev build * release 0.28.0: updated version to 0.28.0 * updated version to 0.29.0-SNAPSHOT * CDR-933 add template id column * CDR-933 Add template id to queryable columns * Formatting * CDR-933 Query extracted column for template id * CDR-933 fix some issue * CDR-933 Fix != for template id * CDR-891 avoid class in init cycle * Adjustments IdentifiedPath.from renamed to root * CDR-929 support abstract types in from * Fix template cache tenant association bug * Set yb_bnl_batch_size for ehrbase database * Set ehrbase.current_tenant as Number, not String * PathAnalysis WIP * CDR-929 Add template_id to query supported test * CDR-968 PathAnalysis WIP * CDR-968 Extracted PathCoherenceAnalysis, TreeNode * CDR-968 WIP PathCoherenceAnalysis * CDR-968 WIP PathCoherenceAnalysis * CDR-968 PathCoherenceAnalysis: finished handling of root predicates * CDR-968 introduced childOrder for TreeUtil::renderTree * CDR-968 typo PathCohesionAnalysis * Feature/cdr 920 templates with same (#1158) * check if internal id works * fix & cleanup * cleanup * fix & cleanup * add tenant id comment * fix & cleanup * fix & cleanup * fix for non existing case * spotless * fix wrongly set parameter * fix & cleanup correct only for DefaultTenantAuthentication * Revert "fix & cleanup correct only for DefaultTenantAuthentication" This reverts commit 105cd60. * cleanup * CDR-968 PathCohesionAnalysis tests + cleanup * CDR-929 support AND in CONTAINS (incl. minor prep for OR) * CDR-929 Fix EHR root qubquery * CDR-929 Fix select field for ehr_id/value * Feature/cdr 1007 cleanup security context (#1159) * clean up security context * fix & cleanup correct only for DefaultTenantAuthentication * register an interceptor * add before filters & interceptor for auth-type when none * CDR-999 WIP: CONTAINS with OR * release 0.29.0: updated version to 0.29.0 * updated version to 0.30.0-SNAPSHOT * Bump org.apache.commons:commons-lang3 from 3.12.0 to 3.13.0 Bumps org.apache.commons:commons-lang3 from 3.12.0 to 3.13.0. --- updated-dependencies: - dependency-name: org.apache.commons:commons-lang3 dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> * fix the location * update CHANGELOG.md * XACML stuff * Add XACML auth for create ehr * Add XACML action and resource id * CDR-790 Add packaging as jar * Add tenant policy lookup to EHR Controller * Rebased on Dev * changed constraint name * Adapted to cdr-xaml-authorization-lib * Rebased on Dev * Remove libraries * Add missing import * Rename xacml url param for query controller * Change annotations order * Add AccessCtrlException handling * Add AccessCtrlException handling * Tmp. commit * Rebased on dev * Spotless * Tmp. commit * Revert "Tmp. commit" This reverts commit 5f070e4. * Removed all XACML/Security logic * Change mvn dependency * Changes XACML Impl. custom logic to handle the ehrbase external annotation which enforces xacml checks * cleanup * Rest endpoint instanciationis now surpressed by bean name * Review change * Update sonar orb to 2.0.0 * Bump jooq.version from 3.18.5 to 3.18.6 (#1162) Bumps `jooq.version` from 3.18.5 to 3.18.6. Updates `org.jooq:jooq` from 3.18.5 to 3.18.6 Updates `org.jooq:jooq-codegen-maven` from 3.18.5 to 3.18.6 --- updated-dependencies: - dependency-name: org.jooq:jooq dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.jooq:jooq-codegen-maven dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * CDR-999 Fix contains chain building with EHR root * CDR-941 Fix storing/reading attributes of Locatable.name (#1161) * CDR-941 Fix DvText.mappings and DvCodedText.defining_code.preferred_term not being stored for Locatable.name * Update CHANGELOG.md * Formatting * CDR-941 use snake case attribute names in /name to make them queryable via AQL * CDR-941 adjust test * CDR-941 Add migration script * add migration hint to updating.md * CDR-941 make migration optional + adjust UPDATING.md * CDR-1016 Add order by for extracted columns + formatting * CDR-1016 Fix NPE * Update SDK to 2.2.0-SNAPSHOT * CDR-1016 exclude template id from ORDER BY * CDR-999 Use subqueries for complex OR operands in contains * Bump net.bull.javamelody:javamelody-spring-boot-starter (#1156) Bumps [net.bull.javamelody:javamelody-spring-boot-starter](https://github.com/javamelody/javamelody) from 1.94.0 to 1.95.0. - [Release notes](https://github.com/javamelody/javamelody/releases) - [Changelog](https://github.com/javamelody/javamelody/blob/master/javamelody-release.cmd) - [Commits](javamelody/javamelody@javamelody-core-1.94.0...javamelody-core-1.95.0) --- updated-dependencies: - dependency-name: net.bull.javamelody:javamelody-spring-boot-starter dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * release 0.30.0: updated version to 0.30.0 * updated version to 0.31.0-SNAPSHOT * Bump io.micrometer:micrometer-registry-prometheus from 1.11.2 to 1.11.3 (#1167) Bumps [io.micrometer:micrometer-registry-prometheus](https://github.com/micrometer-metrics/micrometer) from 1.11.2 to 1.11.3. - [Release notes](https://github.com/micrometer-metrics/micrometer/releases) - [Commits](micrometer-metrics/micrometer@v1.11.2...v1.11.3) --- updated-dependencies: - dependency-name: io.micrometer:micrometer-registry-prometheus dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Adjust condition that prevented index usage * Remove commented security.authType * Add changelog documentation * Fixed changelog file for version 0.30.0 * Bump spring-boot.version from 2.7.14 to 2.7.15 (#1171) Bumps `spring-boot.version` from 2.7.14 to 2.7.15. Updates `org.springframework.boot:spring-boot-dependencies` from 2.7.14 to 2.7.15 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.14...v2.7.15) Updates `org.springframework.boot:spring-boot-starter-logging` from 2.7.14 to 2.7.15 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.14...v2.7.15) Updates `org.springframework.boot:spring-boot-maven-plugin` from 2.7.14 to 2.7.15 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.14...v2.7.15) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump org.apache.maven.plugins:maven-enforcer-plugin from 3.3.0 to 3.4.0 (#1170) Bumps [org.apache.maven.plugins:maven-enforcer-plugin](https://github.com/apache/maven-enforcer) from 3.3.0 to 3.4.0. - [Release notes](https://github.com/apache/maven-enforcer/releases) - [Commits](apache/maven-enforcer@enforcer-3.3.0...enforcer-3.4.0) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-enforcer-plugin dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Update GitHub actions to latest versions (#1172) * Update GitHub actions to latest versions * Add dependabot support for github-actions * Set LOCALE for DB in setup script * Update CHANGELOG.md Fix typo * Feature/cdr 1037 spring boot3 (#1174) * migrate to sporing boot 3 * downgrade jbx implementation * disable auth * update auth * exclude commons-logging * match trailing slash * update basic auth * code cleanup * fix: trigger CircleCI * fix: trigger CircleCI * update changelog * code cleanup --------- Co-authored-by: vladislavploaia <vladislav.ploaia.ext@vitagroup.ag> * add language as default (#1166) * Bump spring-boot.version from 3.1.1 to 3.1.3 (#1177) Bumps `spring-boot.version` from 3.1.1 to 3.1.3. Updates `org.springframework.boot:spring-boot-dependencies` from 3.1.1 to 3.1.3 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.1...v3.1.3) Updates `org.springframework.boot:spring-boot-starter-logging` from 3.1.1 to 3.1.3 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.1...v3.1.3) Updates `org.springframework.boot:spring-boot-maven-plugin` from 3.1.1 to 3.1.3 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.1...v3.1.3) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump org.apache.maven.plugins:maven-enforcer-plugin from 3.4.0 to 3.4.1 (#1178) Bumps [org.apache.maven.plugins:maven-enforcer-plugin](https://github.com/apache/maven-enforcer) from 3.4.0 to 3.4.1. - [Release notes](https://github.com/apache/maven-enforcer/releases) - [Commits](apache/maven-enforcer@enforcer-3.4.0...enforcer-3.4.1) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-enforcer-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump actions/checkout from 3 to 4 (#1176) Bumps [actions/checkout](https://github.com/actions/checkout) from 3 to 4. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](actions/checkout@v3...v4) --- updated-dependencies: - dependency-name: actions/checkout dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Enabled swagger ui working with Spring Boot 3 * Bump io.micrometer:micrometer-registry-prometheus from 1.11.3 to 1.11.4 (#1184) Bumps [io.micrometer:micrometer-registry-prometheus](https://github.com/micrometer-metrics/micrometer) from 1.11.3 to 1.11.4. - [Release notes](https://github.com/micrometer-metrics/micrometer/releases) - [Commits](micrometer-metrics/micrometer@v1.11.3...v1.11.4) --- updated-dependencies: - dependency-name: io.micrometer:micrometer-registry-prometheus dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/build-push-action from 4 to 5 (#1182) Bumps [docker/build-push-action](https://github.com/docker/build-push-action) from 4 to 5. - [Release notes](https://github.com/docker/build-push-action/releases) - [Commits](docker/build-push-action@v4...v5) --- updated-dependencies: - dependency-name: docker/build-push-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/setup-buildx-action from 2 to 3 (#1181) Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 2 to 3. - [Release notes](https://github.com/docker/setup-buildx-action/releases) - [Commits](docker/setup-buildx-action@v2...v3) --- updated-dependencies: - dependency-name: docker/setup-buildx-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/login-action from 2 to 3 (#1183) Bumps [docker/login-action](https://github.com/docker/login-action) from 2 to 3. - [Release notes](https://github.com/docker/login-action/releases) - [Commits](docker/login-action@v2...v3) --- updated-dependencies: - dependency-name: docker/login-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Add plugin path to sonar-project.properties (#1180) * Bump spring-boot.version from 3.1.3 to 3.1.4 (#1187) Bumps `spring-boot.version` from 3.1.3 to 3.1.4. Updates `org.springframework.boot:spring-boot-dependencies` from 3.1.3 to 3.1.4 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.3...v3.1.4) Updates `org.springframework.boot:spring-boot-starter-logging` from 3.1.3 to 3.1.4 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.3...v3.1.4) Updates `org.springframework.boot:spring-boot-maven-plugin` from 3.1.3 to 3.1.4 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.3...v3.1.4) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * code cleanup (#1188) * Feature/pmk 251 (#1190) * change github action * fix AqlRoutines * inline parmeters * remove unnecessary DSL.field * fix order by * fix func build * fix review * Revert "change github action" This reverts commit 90714d9. * Changelog for #1190 --------- Co-authored-by: Alex Vidrean <alex.vidrean@gmail.com> * release 0.31.0: updated version to 0.31.0 * updated version to 0.32.0-SNAPSHOT * try out Java 21 --------- Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: Dmitry Tulba <tulbad1@gmail.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: Alex Vidrean <alex.vidrean@gmail.com> Co-authored-by: vinzenz.mueller <vinzenz.mueller@vitagroup.ag> Co-authored-by: Holger Reise <holger.reise@vitagroup.ag> Co-authored-by: bot <bot@ehrbase.org> Co-authored-by: MBA <michael.baumann@vitagroup.ag> Co-authored-by: vmueller-vg <100680528+vmueller-vg@users.noreply.github.com> Co-authored-by: vladislavploaia <vladislav.ploaia.ext@vitagroup.ag> * update pipline * feat: cdr-1068 add Robot tests for STORED QUERY to build pipeline * add docker experimental build * make admin configurable and make management configurable * use the same now * change action * optimize ehr exist check * remove audit map for queries --------- Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: Holger Reise <holger.reise@vitagroup.ag> Co-authored-by: Dmitry Tulba <tulbad1@gmail.com> Co-authored-by: vinzenz.mueller <vinzenz.mueller@vitagroup.ag> Co-authored-by: Alex <alex.vidrean@gmail.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: bot <bot@ehrbase.org> Co-authored-by: MBA <michael.baumann@vitagroup.ag> Co-authored-by: vmueller-vg <100680528+vmueller-vg@users.noreply.github.com> Co-authored-by: vladislavploaia <vladislav.ploaia.ext@vitagroup.ag>
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this pull request
Jan 29, 2024
* CDR-934 Adjust PathAnalysis for AqlObjectPath * Cleanup: renamed QueryService etc. * CDR-882 prepare for analyzing EHR_STATUS & FOLDER * Cleanup * CDR-882 fix aql path in exceptions * CDR-933 add template id column * CDR-933 Add template id to queryable columns * Formatting * CDR-933 Query extracted column for template id * CDR-933 fix some issue * CDR-933 Fix != for template id * CDR-891 avoid class in init cycle * Adjustments IdentifiedPath.from renamed to root * CDR-929 support abstract types in from * Fix template cache tenant association bug * Set yb_bnl_batch_size for ehrbase database * Set ehrbase.current_tenant as Number, not String * PathAnalysis WIP * CDR-929 Add template_id to query supported test * CDR-968 PathAnalysis WIP * CDR-968 Extracted PathCoherenceAnalysis, TreeNode * CDR-968 WIP PathCoherenceAnalysis * CDR-968 WIP PathCoherenceAnalysis * CDR-968 PathCoherenceAnalysis: finished handling of root predicates * CDR-968 introduced childOrder for TreeUtil::renderTree * CDR-968 typo PathCohesionAnalysis * CDR-968 PathCohesionAnalysis tests + cleanup * CDR-929 support AND in CONTAINS (incl. minor prep for OR) * CDR-929 Fix EHR root qubquery * CDR-929 Fix select field for ehr_id/value * CDR-999 WIP: CONTAINS with OR * CDR-999 Fix contains chain building with EHR root * CDR-1016 Add order by for extracted columns + formatting * CDR-1016 Fix NPE * Update SDK to 2.2.0-SNAPSHOT * CDR-1016 exclude template id from ORDER BY * CDR-999 Use subqueries for complex OR operands in contains * Adjust condition that prevented index usage * CDR-896 WIP: Joining path hierachy * Remove nonsense test things * CDR-896 WIP: Selecting paths * CDR-896 WIP: Selecting paths * CDR-968 Cleanup + Javadoc JoinMode * CDR-896 WIP current state of path joining before new intermediate layer * Set LOCALE for DB in setup script * CDR-896 WIP introduce ASL model * CDR-896 WIP: ASL * CDR-896 WIP: ASL * CDR-896 WIP: ASL * CDR-896 WIP: ASL * CDR-896 WIP: ASL (logicalOperatorCondition) * CDR-896 WIP: ASL->SQL * CDR-896 WIP: ASL->SQL * CDR-896 WIP: ASL -> SQL * CDR-896 refactoring AslField name * CDR-896 introduced AslRmTypeAndConcept * CDR-896 cleanup * CDR-896 AqlQueryRepository: (temporarily) commented out legacy methods * CDR-896 fixed ANodeTest * CDR-896 fix NPE in exception handling * CDR-896 do not alias colum name when owner == provider * CDR-896 RM types constraint + shortened sqAlias * CDR-896 WIP: ASL -> SQL * CDR-896 WIP * CDR-896 Fixes for ASL/SQL * Add spring-boot dev tools * CDR-896 data query * CDR-896 fix AND/OR set operator conditions and selecting from inside them * CDR-896 Fix path attribute conditions * Added helper for analyzing Compositions * CDR-896 Added helper for analyzing ASL queries * CDR-896 Extracted AqlQueryServiceImp::analyzeQuery etc.; some sealed classes * CDR-896 AqlToAslUtil * CDR-896 removed auditResultMap param from AqlQueryService::query * CDR-896 order by + fix EXISTS * Formatting + fix for AslGraph * CDR-896 query extracted columns in paths * CDR-896 WIP * CDR-896 test for invalid paths * Update spotless and used palantir-java-format version for JDK 21 compatibility * CDR-896 WIP: ASL for path filters * CDR-896 Element as Structure * try out Java 21 * Fix contains set operator join type * Fix EHR is predicate * CDR-896 ASL for path filtering * JRE 21 in dockerfile * CDR-896 WIP: path filtering SQL * CDR-896 fixed archetypenodeid + finish path filter * CDR-896 JsonDataParsing: canonical OM; switch item(s) aliases i/j; EncapsulatingQuery alias * CDR-896 switch item(s) aliases i/j: disable failing tests * CDR-896 fix NPE * CDR-896 canonical json in data + locatable name in US collation + cleanup * CDR-896 asl (not sql) for single-valued json paths * Feature/474 enhance aql query stub update (#51) * Adjustments IdentifiedPath.from renamed to root * add logs * fix isUpdate (#36) * Update SDK to 2.2.0-SNAPSHOT * Feature/spring boot 3 (#33) * migrate to sporing boot 3 * test * test * test * test * test * test * downgrade jbx implementation * Feature/cdr 1037 spring boot3 (#1174) * migrate to sporing boot 3 * downgrade jbx implementation * disable auth * update auth * exclude commons-logging * match trailing slash * update basic auth * code cleanup * fix: trigger CircleCI * fix: trigger CircleCI * update changelog * code cleanup --------- Co-authored-by: vladislavploaia <vladislav.ploaia.ext@vitagroup.ag> (cherry picked from commit 5842be7) * Add dependabot support for github-actions (#39) * Feature/update actions (#43) * Bump actions/checkout from 3 to 4 Bumps [actions/checkout](https://github.com/actions/checkout) from 3 to 4. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](actions/checkout@v3...v4) --- updated-dependencies: - dependency-name: actions/checkout dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> * Bump joonvena/robotframework-reporter-action from 2.2 to 2.3 Bumps [joonvena/robotframework-reporter-action](https://github.com/joonvena/robotframework-reporter-action) from 2.2 to 2.3. - [Release notes](https://github.com/joonvena/robotframework-reporter-action/releases) - [Commits](joonvena/robotframework-reporter-action@v2.2...v2.3) --- updated-dependencies: - dependency-name: joonvena/robotframework-reporter-action dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> --------- Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Merge candidate (#40) * CDR-934 Adjust PathAnalysis for AqlObjectPath * Cleanup: renamed QueryService etc. * CDR-882 prepare for analyzing EHR_STATUS & FOLDER * Cleanup * CDR-882 fix aql path in exceptions * CDR-933 add template id column * CDR-933 Add template id to queryable columns * Formatting * CDR-933 Query extracted column for template id * CDR-933 fix some issue * CDR-933 Fix != for template id * CDR-891 avoid class in init cycle * Adjustments IdentifiedPath.from renamed to root * CDR-929 support abstract types in from * Fix template cache tenant association bug * Set yb_bnl_batch_size for ehrbase database * Set ehrbase.current_tenant as Number, not String * PathAnalysis WIP * CDR-929 Add template_id to query supported test * CDR-968 PathAnalysis WIP * CDR-968 Extracted PathCoherenceAnalysis, TreeNode * CDR-968 WIP PathCoherenceAnalysis * CDR-968 WIP PathCoherenceAnalysis * CDR-968 PathCoherenceAnalysis: finished handling of root predicates * CDR-968 introduced childOrder for TreeUtil::renderTree * CDR-968 typo PathCohesionAnalysis * CDR-968 PathCohesionAnalysis tests + cleanup * CDR-929 support AND in CONTAINS (incl. minor prep for OR) * CDR-929 Fix EHR root qubquery * CDR-929 Fix select field for ehr_id/value * CDR-999 WIP: CONTAINS with OR * CDR-999 Fix contains chain building with EHR root * CDR-1016 Add order by for extracted columns + formatting * CDR-1016 Fix NPE * Update SDK to 2.2.0-SNAPSHOT * CDR-1016 exclude template id from ORDER BY * CDR-999 Use subqueries for complex OR operands in contains * Adjust condition that prevented index usage * Set LOCALE for DB in setup script --------- Co-authored-by: Holger Reise <holger.reise@vitagroup.ag> Co-authored-by: vinzenz.mueller <vinzenz.mueller@vitagroup.ag> * Update OpenehrDirectoryController.java * Merge candidate (#50) * add remove cascade for sys tenant foreign keys * Bump jooq.version from 3.18.4 to 3.18.5 (#1143) Bumps `jooq.version` from 3.18.4 to 3.18.5. Updates `jooq` from 3.18.4 to 3.18.5 Updates `jooq-codegen-maven` from 3.18.4 to 3.18.5 --- updated-dependencies: - dependency-name: org.jooq:jooq dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.jooq:jooq-codegen-maven dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump spring-boot.version from 2.7.12 to 2.7.13 (#1144) Bumps `spring-boot.version` from 2.7.12 to 2.7.13. Updates `spring-boot-dependencies` from 2.7.12 to 2.7.13 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.12...v2.7.13) Updates `spring-boot-starter-logging` from 2.7.12 to 2.7.13 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.12...v2.7.13) Updates `spring-boot-maven-plugin` from 2.7.12 to 2.7.13 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.12...v2.7.13) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Add example scope to OpenEHR template example endpoint * CDR-934 move AqlPath * add tenant deletion * CDR-934 Adjust PathAnalysis for AqlObjectPath * update CHANGELOG.md * clean up * fix query & add stored query endpoint * fix query & add stored query endpoint * Bump micrometer-registry-prometheus from 1.11.1 to 1.11.2 (#1148) Bumps [micrometer-registry-prometheus](https://github.com/micrometer-metrics/micrometer) from 1.11.1 to 1.11.2. - [Release notes](https://github.com/micrometer-metrics/micrometer/releases) - [Commits](micrometer-metrics/micrometer@v1.11.1...v1.11.2) --- updated-dependencies: - dependency-name: io.micrometer:micrometer-registry-prometheus dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * cleanup & refactoring * cleanup * Cleanup: renamed QueryService etc. * CDR-882 prepare for analyzing EHR_STATUS & FOLDER * Bump spring-boot.version from 2.7.13 to 2.7.14 (#1154) Bumps `spring-boot.version` from 2.7.13 to 2.7.14. Updates `org.springframework.boot:spring-boot-dependencies` from 2.7.13 to 2.7.14 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.13...v2.7.14) Updates `org.springframework.boot:spring-boot-starter-logging` from 2.7.13 to 2.7.14 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.13...v2.7.14) Updates `org.springframework.boot:spring-boot-maven-plugin` from 2.7.13 to 2.7.14 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.13...v2.7.14) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * add audit directory (#1150) * add audit directory * audit delete directory * Cleanup * CDR-882 fix aql path in exceptions * Update release workflow to use java 17 * Use setup java v3 in the release workflow * Remove unnecessary setup java from release workflow * Don't skip tests for sdk dev build * release 0.28.0: updated version to 0.28.0 * updated version to 0.29.0-SNAPSHOT * CDR-933 add template id column * CDR-933 Add template id to queryable columns * Formatting * CDR-933 Query extracted column for template id * CDR-933 fix some issue * CDR-933 Fix != for template id * CDR-891 avoid class in init cycle * Adjustments IdentifiedPath.from renamed to root * CDR-929 support abstract types in from * Fix template cache tenant association bug * Set yb_bnl_batch_size for ehrbase database * Set ehrbase.current_tenant as Number, not String * PathAnalysis WIP * CDR-929 Add template_id to query supported test * CDR-968 PathAnalysis WIP * CDR-968 Extracted PathCoherenceAnalysis, TreeNode * CDR-968 WIP PathCoherenceAnalysis * CDR-968 WIP PathCoherenceAnalysis * CDR-968 PathCoherenceAnalysis: finished handling of root predicates * CDR-968 introduced childOrder for TreeUtil::renderTree * CDR-968 typo PathCohesionAnalysis * Feature/cdr 920 templates with same (#1158) * check if internal id works * fix & cleanup * cleanup * fix & cleanup * add tenant id comment * fix & cleanup * fix & cleanup * fix for non existing case * spotless * fix wrongly set parameter * fix & cleanup correct only for DefaultTenantAuthentication * Revert "fix & cleanup correct only for DefaultTenantAuthentication" This reverts commit 105cd60. * cleanup * CDR-968 PathCohesionAnalysis tests + cleanup * CDR-929 support AND in CONTAINS (incl. minor prep for OR) * CDR-929 Fix EHR root qubquery * CDR-929 Fix select field for ehr_id/value * Feature/cdr 1007 cleanup security context (#1159) * clean up security context * fix & cleanup correct only for DefaultTenantAuthentication * register an interceptor * add before filters & interceptor for auth-type when none * CDR-999 WIP: CONTAINS with OR * release 0.29.0: updated version to 0.29.0 * updated version to 0.30.0-SNAPSHOT * Bump org.apache.commons:commons-lang3 from 3.12.0 to 3.13.0 Bumps org.apache.commons:commons-lang3 from 3.12.0 to 3.13.0. --- updated-dependencies: - dependency-name: org.apache.commons:commons-lang3 dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> * fix the location * update CHANGELOG.md * XACML stuff * Add XACML auth for create ehr * Add XACML action and resource id * CDR-790 Add packaging as jar * Add tenant policy lookup to EHR Controller * Rebased on Dev * changed constraint name * Adapted to cdr-xaml-authorization-lib * Rebased on Dev * Remove libraries * Add missing import * Rename xacml url param for query controller * Change annotations order * Add AccessCtrlException handling * Add AccessCtrlException handling * Tmp. commit * Rebased on dev * Spotless * Tmp. commit * Revert "Tmp. commit" This reverts commit 5f070e4. * Removed all XACML/Security logic * Change mvn dependency * Changes XACML Impl. custom logic to handle the ehrbase external annotation which enforces xacml checks * cleanup * Rest endpoint instanciationis now surpressed by bean name * Review change * Update sonar orb to 2.0.0 * Bump jooq.version from 3.18.5 to 3.18.6 (#1162) Bumps `jooq.version` from 3.18.5 to 3.18.6. Updates `org.jooq:jooq` from 3.18.5 to 3.18.6 Updates `org.jooq:jooq-codegen-maven` from 3.18.5 to 3.18.6 --- updated-dependencies: - dependency-name: org.jooq:jooq dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.jooq:jooq-codegen-maven dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * CDR-999 Fix contains chain building with EHR root * CDR-941 Fix storing/reading attributes of Locatable.name (#1161) * CDR-941 Fix DvText.mappings and DvCodedText.defining_code.preferred_term not being stored for Locatable.name * Update CHANGELOG.md * Formatting * CDR-941 use snake case attribute names in /name to make them queryable via AQL * CDR-941 adjust test * CDR-941 Add migration script * add migration hint to updating.md * CDR-941 make migration optional + adjust UPDATING.md * CDR-1016 Add order by for extracted columns + formatting * CDR-1016 Fix NPE * Update SDK to 2.2.0-SNAPSHOT * CDR-1016 exclude template id from ORDER BY * CDR-999 Use subqueries for complex OR operands in contains * Bump net.bull.javamelody:javamelody-spring-boot-starter (#1156) Bumps [net.bull.javamelody:javamelody-spring-boot-starter](https://github.com/javamelody/javamelody) from 1.94.0 to 1.95.0. - [Release notes](https://github.com/javamelody/javamelody/releases) - [Changelog](https://github.com/javamelody/javamelody/blob/master/javamelody-release.cmd) - [Commits](javamelody/javamelody@javamelody-core-1.94.0...javamelody-core-1.95.0) --- updated-dependencies: - dependency-name: net.bull.javamelody:javamelody-spring-boot-starter dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * release 0.30.0: updated version to 0.30.0 * updated version to 0.31.0-SNAPSHOT * Bump io.micrometer:micrometer-registry-prometheus from 1.11.2 to 1.11.3 (#1167) Bumps [io.micrometer:micrometer-registry-prometheus](https://github.com/micrometer-metrics/micrometer) from 1.11.2 to 1.11.3. - [Release notes](https://github.com/micrometer-metrics/micrometer/releases) - [Commits](micrometer-metrics/micrometer@v1.11.2...v1.11.3) --- updated-dependencies: - dependency-name: io.micrometer:micrometer-registry-prometheus dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Adjust condition that prevented index usage * Remove commented security.authType * Add changelog documentation * Fixed changelog file for version 0.30.0 * Bump spring-boot.version from 2.7.14 to 2.7.15 (#1171) Bumps `spring-boot.version` from 2.7.14 to 2.7.15. Updates `org.springframework.boot:spring-boot-dependencies` from 2.7.14 to 2.7.15 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.14...v2.7.15) Updates `org.springframework.boot:spring-boot-starter-logging` from 2.7.14 to 2.7.15 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.14...v2.7.15) Updates `org.springframework.boot:spring-boot-maven-plugin` from 2.7.14 to 2.7.15 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.14...v2.7.15) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump org.apache.maven.plugins:maven-enforcer-plugin from 3.3.0 to 3.4.0 (#1170) Bumps [org.apache.maven.plugins:maven-enforcer-plugin](https://github.com/apache/maven-enforcer) from 3.3.0 to 3.4.0. - [Release notes](https://github.com/apache/maven-enforcer/releases) - [Commits](apache/maven-enforcer@enforcer-3.3.0...enforcer-3.4.0) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-enforcer-plugin dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Update GitHub actions to latest versions (#1172) * Update GitHub actions to latest versions * Add dependabot support for github-actions * Set LOCALE for DB in setup script * Update CHANGELOG.md Fix typo * Feature/cdr 1037 spring boot3 (#1174) * migrate to sporing boot 3 * downgrade jbx implementation * disable auth * update auth * exclude commons-logging * match trailing slash * update basic auth * code cleanup * fix: trigger CircleCI * fix: trigger CircleCI * update changelog * code cleanup --------- Co-authored-by: vladislavploaia <vladislav.ploaia.ext@vitagroup.ag> * add language as default (#1166) * Bump spring-boot.version from 3.1.1 to 3.1.3 (#1177) Bumps `spring-boot.version` from 3.1.1 to 3.1.3. Updates `org.springframework.boot:spring-boot-dependencies` from 3.1.1 to 3.1.3 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.1...v3.1.3) Updates `org.springframework.boot:spring-boot-starter-logging` from 3.1.1 to 3.1.3 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.1...v3.1.3) Updates `org.springframework.boot:spring-boot-maven-plugin` from 3.1.1 to 3.1.3 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.1...v3.1.3) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump org.apache.maven.plugins:maven-enforcer-plugin from 3.4.0 to 3.4.1 (#1178) Bumps [org.apache.maven.plugins:maven-enforcer-plugin](https://github.com/apache/maven-enforcer) from 3.4.0 to 3.4.1. - [Release notes](https://github.com/apache/maven-enforcer/releases) - [Commits](apache/maven-enforcer@enforcer-3.4.0...enforcer-3.4.1) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-enforcer-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump actions/checkout from 3 to 4 (#1176) Bumps [actions/checkout](https://github.com/actions/checkout) from 3 to 4. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](actions/checkout@v3...v4) --- updated-dependencies: - dependency-name: actions/checkout dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Enabled swagger ui working with Spring Boot 3 * Bump io.micrometer:micrometer-registry-prometheus from 1.11.3 to 1.11.4 (#1184) Bumps [io.micrometer:micrometer-registry-prometheus](https://github.com/micrometer-metrics/micrometer) from 1.11.3 to 1.11.4. - [Release notes](https://github.com/micrometer-metrics/micrometer/releases) - [Commits](micrometer-metrics/micrometer@v1.11.3...v1.11.4) --- updated-dependencies: - dependency-name: io.micrometer:micrometer-registry-prometheus dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/build-push-action from 4 to 5 (#1182) Bumps [docker/build-push-action](https://github.com/docker/build-push-action) from 4 to 5. - [Release notes](https://github.com/docker/build-push-action/releases) - [Commits](docker/build-push-action@v4...v5) --- updated-dependencies: - dependency-name: docker/build-push-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/setup-buildx-action from 2 to 3 (#1181) Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 2 to 3. - [Release notes](https://github.com/docker/setup-buildx-action/releases) - [Commits](docker/setup-buildx-action@v2...v3) --- updated-dependencies: - dependency-name: docker/setup-buildx-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/login-action from 2 to 3 (#1183) Bumps [docker/login-action](https://github.com/docker/login-action) from 2 to 3. - [Release notes](https://github.com/docker/login-action/releases) - [Commits](docker/login-action@v2...v3) --- updated-dependencies: - dependency-name: docker/login-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Add plugin path to sonar-project.properties (#1180) * Bump spring-boot.version from 3.1.3 to 3.1.4 (#1187) Bumps `spring-boot.version` from 3.1.3 to 3.1.4. Updates `org.springframework.boot:spring-boot-dependencies` from 3.1.3 to 3.1.4 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.3...v3.1.4) Updates `org.springframework.boot:spring-boot-starter-logging` from 3.1.3 to 3.1.4 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.3...v3.1.4) Updates `org.springframework.boot:spring-boot-maven-plugin` from 3.1.3 to 3.1.4 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.3...v3.1.4) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * code cleanup (#1188) * Feature/pmk 251 (#1190) * change github action * fix AqlRoutines * inline parmeters * remove unnecessary DSL.field * fix order by * fix func build * fix review * Revert "change github action" This reverts commit 90714d9. * Changelog for #1190 --------- Co-authored-by: Alex Vidrean <alex.vidrean@gmail.com> * release 0.31.0: updated version to 0.31.0 * updated version to 0.32.0-SNAPSHOT * try out Java 21 --------- Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: Dmitry Tulba <tulbad1@gmail.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: Alex Vidrean <alex.vidrean@gmail.com> Co-authored-by: vinzenz.mueller <vinzenz.mueller@vitagroup.ag> Co-authored-by: Holger Reise <holger.reise@vitagroup.ag> Co-authored-by: bot <bot@ehrbase.org> Co-authored-by: MBA <michael.baumann@vitagroup.ag> Co-authored-by: vmueller-vg <100680528+vmueller-vg@users.noreply.github.com> Co-authored-by: vladislavploaia <vladislav.ploaia.ext@vitagroup.ag> --------- Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: Holger Reise <holger.reise@vitagroup.ag> Co-authored-by: Dmitry Tulba <tulbad1@gmail.com> Co-authored-by: vinzenz.mueller <vinzenz.mueller@vitagroup.ag> Co-authored-by: Alex <alex.vidrean@gmail.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: bot <bot@ehrbase.org> Co-authored-by: MBA <michael.baumann@vitagroup.ag> Co-authored-by: vmueller-vg <100680528+vmueller-vg@users.noreply.github.com> Co-authored-by: vladislavploaia <vladislav.ploaia.ext@vitagroup.ag> * Revert to ehrbase-yugabyte:schema * update pipline * fix queryController * fix SecurityFilter * Restore AqlToSqlUtilTest * Cleanup * Add AslSingleValuedPathDataQuery * cleanup * CDR-896 fixes for preparations single-valued json paths * CDR-896 order by archetype_node_id * CDR-896 fixed AslGraph * CDR-896 initial not sql for single-valued json paths (only object paths) * CDR-896 support for querying some foundation types * CDR-896 support for querying FOUNDATION_EXTENDED (foundation or rm) * spotless * CDR-896 amend StructureRmType + cleanup - cleanup JsonDataParsing - cleanup StructureRmType + consistency tests * CDR-896 let StructureNode.contentItem reference parent archetype, not parent structure node * CDR-896 relaxed path StructureSubQuery rm constraints + refactoring * CDR-993 SELECT DISTINCT * Workaround: Disabled batched nested loops * add docker experimental build * fix docker experimental build * fix use internal uuid (#53) * fix use internal uuid * disable test * disable test * DB Cleanup: citem_num instead of citem_type and citem_concept citem_type and citem_concept may have to be reintroduced later, but this is easily migratable. * DB Cleanup: remove struc_num num can now be used, because json arrays are no longer disassembled * fixed CompositionOneStructure::createStructureDto * fix: mutable AslOrQueryCondition operands list * some performance improvements * CDR-942 basic support for AQL string parameters * make admin configurable and make management configurable * CDR-942 AQL: rely only on vo_id, not version, when ordering by composition id * fix NPE * fix inline system * Add explicit ant matcher to basic auth * cleanup * update license headers * CDR-942 Enhancements complex extracted columns & order by - use anonymous rows instead of string concatenation - add sort fields needed for DISTINCT to SELECT - ::orderByArchetypeNodeId: inline constants, cleanup LIKE * Add explicit ant matcher to oauth2 auth * CDR-942 cleanup + join by num * use the same now * change action * optimize ehr exist check * remove audit map for queries --------- Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: Holger Reise <holger.reise@vitagroup.ag> Co-authored-by: vinzenz.mueller <vinzenz.mueller@vitagroup.ag> Co-authored-by: Dmitry Tulba <tulbad1@gmail.com> Co-authored-by: Alex <alex.vidrean@gmail.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: bot <bot@ehrbase.org> Co-authored-by: MBA <michael.baumann@vitagroup.ag> Co-authored-by: vmueller-vg <100680528+vmueller-vg@users.noreply.github.com> Co-authored-by: vladislavploaia <vladislav.ploaia.ext@vitagroup.ag>
stefanspiska
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Jan 29, 2024
* add remove cascade for sys tenant foreign keys * Bump jooq.version from 3.18.4 to 3.18.5 (#1143) Bumps `jooq.version` from 3.18.4 to 3.18.5. Updates `jooq` from 3.18.4 to 3.18.5 Updates `jooq-codegen-maven` from 3.18.4 to 3.18.5 --- updated-dependencies: - dependency-name: org.jooq:jooq dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.jooq:jooq-codegen-maven dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump spring-boot.version from 2.7.12 to 2.7.13 (#1144) Bumps `spring-boot.version` from 2.7.12 to 2.7.13. Updates `spring-boot-dependencies` from 2.7.12 to 2.7.13 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.12...v2.7.13) Updates `spring-boot-starter-logging` from 2.7.12 to 2.7.13 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.12...v2.7.13) Updates `spring-boot-maven-plugin` from 2.7.12 to 2.7.13 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.12...v2.7.13) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Add example scope to OpenEHR template example endpoint * CDR-934 move AqlPath * add tenant deletion * update CHANGELOG.md * clean up * fix query & add stored query endpoint * fix query & add stored query endpoint * Bump micrometer-registry-prometheus from 1.11.1 to 1.11.2 (#1148) Bumps [micrometer-registry-prometheus](https://github.com/micrometer-metrics/micrometer) from 1.11.1 to 1.11.2. - [Release notes](https://github.com/micrometer-metrics/micrometer/releases) - [Commits](micrometer-metrics/micrometer@v1.11.1...v1.11.2) --- updated-dependencies: - dependency-name: io.micrometer:micrometer-registry-prometheus dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * cleanup & refactoring * cleanup * Bump spring-boot.version from 2.7.13 to 2.7.14 (#1154) Bumps `spring-boot.version` from 2.7.13 to 2.7.14. Updates `org.springframework.boot:spring-boot-dependencies` from 2.7.13 to 2.7.14 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.13...v2.7.14) Updates `org.springframework.boot:spring-boot-starter-logging` from 2.7.13 to 2.7.14 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.13...v2.7.14) Updates `org.springframework.boot:spring-boot-maven-plugin` from 2.7.13 to 2.7.14 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.13...v2.7.14) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * add audit directory (#1150) * add audit directory * audit delete directory * Update release workflow to use java 17 * Use setup java v3 in the release workflow * Remove unnecessary setup java from release workflow * Don't skip tests for sdk dev build * release 0.28.0: updated version to 0.28.0 * updated version to 0.29.0-SNAPSHOT * Feature/cdr 920 templates with same (#1158) * check if internal id works * fix & cleanup * cleanup * fix & cleanup * add tenant id comment * fix & cleanup * fix & cleanup * fix for non existing case * spotless * fix wrongly set parameter * fix & cleanup correct only for DefaultTenantAuthentication * Revert "fix & cleanup correct only for DefaultTenantAuthentication" This reverts commit 105cd60. * cleanup * Feature/cdr 1007 cleanup security context (#1159) * clean up security context * fix & cleanup correct only for DefaultTenantAuthentication * register an interceptor * add before filters & interceptor for auth-type when none * release 0.29.0: updated version to 0.29.0 * updated version to 0.30.0-SNAPSHOT * Bump org.apache.commons:commons-lang3 from 3.12.0 to 3.13.0 Bumps org.apache.commons:commons-lang3 from 3.12.0 to 3.13.0. --- updated-dependencies: - dependency-name: org.apache.commons:commons-lang3 dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> * fix the location * update CHANGELOG.md * XACML stuff * Add XACML auth for create ehr * Add XACML action and resource id * CDR-790 Add packaging as jar * Add tenant policy lookup to EHR Controller * Rebased on Dev * changed constraint name * Adapted to cdr-xaml-authorization-lib * Rebased on Dev * Remove libraries * Add missing import * Rename xacml url param for query controller * Change annotations order * Add AccessCtrlException handling * Add AccessCtrlException handling * Tmp. commit * Rebased on dev * Spotless * Tmp. commit * Revert "Tmp. commit" This reverts commit 5f070e4. * Removed all XACML/Security logic * Change mvn dependency * Changes XACML Impl. custom logic to handle the ehrbase external annotation which enforces xacml checks * cleanup * Rest endpoint instanciationis now surpressed by bean name * Review change * Update sonar orb to 2.0.0 * Bump jooq.version from 3.18.5 to 3.18.6 (#1162) Bumps `jooq.version` from 3.18.5 to 3.18.6. Updates `org.jooq:jooq` from 3.18.5 to 3.18.6 Updates `org.jooq:jooq-codegen-maven` from 3.18.5 to 3.18.6 --- updated-dependencies: - dependency-name: org.jooq:jooq dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.jooq:jooq-codegen-maven dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * CDR-941 Fix storing/reading attributes of Locatable.name (#1161) * CDR-941 Fix DvText.mappings and DvCodedText.defining_code.preferred_term not being stored for Locatable.name * Update CHANGELOG.md * Formatting * CDR-941 use snake case attribute names in /name to make them queryable via AQL * CDR-941 adjust test * CDR-941 Add migration script * add migration hint to updating.md * CDR-941 make migration optional + adjust UPDATING.md * Bump net.bull.javamelody:javamelody-spring-boot-starter (#1156) Bumps [net.bull.javamelody:javamelody-spring-boot-starter](https://github.com/javamelody/javamelody) from 1.94.0 to 1.95.0. - [Release notes](https://github.com/javamelody/javamelody/releases) - [Changelog](https://github.com/javamelody/javamelody/blob/master/javamelody-release.cmd) - [Commits](javamelody/javamelody@javamelody-core-1.94.0...javamelody-core-1.95.0) --- updated-dependencies: - dependency-name: net.bull.javamelody:javamelody-spring-boot-starter dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * release 0.30.0: updated version to 0.30.0 * updated version to 0.31.0-SNAPSHOT * Bump io.micrometer:micrometer-registry-prometheus from 1.11.2 to 1.11.3 (#1167) Bumps [io.micrometer:micrometer-registry-prometheus](https://github.com/micrometer-metrics/micrometer) from 1.11.2 to 1.11.3. - [Release notes](https://github.com/micrometer-metrics/micrometer/releases) - [Commits](micrometer-metrics/micrometer@v1.11.2...v1.11.3) --- updated-dependencies: - dependency-name: io.micrometer:micrometer-registry-prometheus dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Remove commented security.authType * Add changelog documentation * Fixed changelog file for version 0.30.0 * Bump spring-boot.version from 2.7.14 to 2.7.15 (#1171) Bumps `spring-boot.version` from 2.7.14 to 2.7.15. Updates `org.springframework.boot:spring-boot-dependencies` from 2.7.14 to 2.7.15 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.14...v2.7.15) Updates `org.springframework.boot:spring-boot-starter-logging` from 2.7.14 to 2.7.15 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.14...v2.7.15) Updates `org.springframework.boot:spring-boot-maven-plugin` from 2.7.14 to 2.7.15 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.14...v2.7.15) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump org.apache.maven.plugins:maven-enforcer-plugin from 3.3.0 to 3.4.0 (#1170) Bumps [org.apache.maven.plugins:maven-enforcer-plugin](https://github.com/apache/maven-enforcer) from 3.3.0 to 3.4.0. - [Release notes](https://github.com/apache/maven-enforcer/releases) - [Commits](apache/maven-enforcer@enforcer-3.3.0...enforcer-3.4.0) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-enforcer-plugin dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Update GitHub actions to latest versions (#1172) * Update GitHub actions to latest versions * Add dependabot support for github-actions * Update CHANGELOG.md Fix typo * Feature/cdr 1037 spring boot3 (#1174) * migrate to sporing boot 3 * downgrade jbx implementation * disable auth * update auth * exclude commons-logging * match trailing slash * update basic auth * code cleanup * fix: trigger CircleCI * fix: trigger CircleCI * update changelog * code cleanup --------- Co-authored-by: vladislavploaia <vladislav.ploaia.ext@vitagroup.ag> * add language as default (#1166) * Bump spring-boot.version from 3.1.1 to 3.1.3 (#1177) Bumps `spring-boot.version` from 3.1.1 to 3.1.3. Updates `org.springframework.boot:spring-boot-dependencies` from 3.1.1 to 3.1.3 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.1...v3.1.3) Updates `org.springframework.boot:spring-boot-starter-logging` from 3.1.1 to 3.1.3 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.1...v3.1.3) Updates `org.springframework.boot:spring-boot-maven-plugin` from 3.1.1 to 3.1.3 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.1...v3.1.3) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump org.apache.maven.plugins:maven-enforcer-plugin from 3.4.0 to 3.4.1 (#1178) Bumps [org.apache.maven.plugins:maven-enforcer-plugin](https://github.com/apache/maven-enforcer) from 3.4.0 to 3.4.1. - [Release notes](https://github.com/apache/maven-enforcer/releases) - [Commits](apache/maven-enforcer@enforcer-3.4.0...enforcer-3.4.1) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-enforcer-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump actions/checkout from 3 to 4 (#1176) Bumps [actions/checkout](https://github.com/actions/checkout) from 3 to 4. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](actions/checkout@v3...v4) --- updated-dependencies: - dependency-name: actions/checkout dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Enabled swagger ui working with Spring Boot 3 * Bump io.micrometer:micrometer-registry-prometheus from 1.11.3 to 1.11.4 (#1184) Bumps [io.micrometer:micrometer-registry-prometheus](https://github.com/micrometer-metrics/micrometer) from 1.11.3 to 1.11.4. - [Release notes](https://github.com/micrometer-metrics/micrometer/releases) - [Commits](micrometer-metrics/micrometer@v1.11.3...v1.11.4) --- updated-dependencies: - dependency-name: io.micrometer:micrometer-registry-prometheus dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/build-push-action from 4 to 5 (#1182) Bumps [docker/build-push-action](https://github.com/docker/build-push-action) from 4 to 5. - [Release notes](https://github.com/docker/build-push-action/releases) - [Commits](docker/build-push-action@v4...v5) --- updated-dependencies: - dependency-name: docker/build-push-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/setup-buildx-action from 2 to 3 (#1181) Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 2 to 3. - [Release notes](https://github.com/docker/setup-buildx-action/releases) - [Commits](docker/setup-buildx-action@v2...v3) --- updated-dependencies: - dependency-name: docker/setup-buildx-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/login-action from 2 to 3 (#1183) Bumps [docker/login-action](https://github.com/docker/login-action) from 2 to 3. - [Release notes](https://github.com/docker/login-action/releases) - [Commits](docker/login-action@v2...v3) --- updated-dependencies: - dependency-name: docker/login-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Add plugin path to sonar-project.properties (#1180) * Bump spring-boot.version from 3.1.3 to 3.1.4 (#1187) Bumps `spring-boot.version` from 3.1.3 to 3.1.4. Updates `org.springframework.boot:spring-boot-dependencies` from 3.1.3 to 3.1.4 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.3...v3.1.4) Updates `org.springframework.boot:spring-boot-starter-logging` from 3.1.3 to 3.1.4 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.3...v3.1.4) Updates `org.springframework.boot:spring-boot-maven-plugin` from 3.1.3 to 3.1.4 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.3...v3.1.4) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * code cleanup (#1188) * Feature/pmk 251 (#1190) * change github action * fix AqlRoutines * inline parmeters * remove unnecessary DSL.field * fix order by * fix func build * fix review * Revert "change github action" This reverts commit 90714d9. * Changelog for #1190 --------- Co-authored-by: Alex Vidrean <alex.vidrean@gmail.com> * release 0.31.0: updated version to 0.31.0 * updated version to 0.32.0-SNAPSHOT * feat: cdr-1068 enable Robot STORED QUERY test suite in CIRCLE CI (#1195) * Bugfix/cdr 1078 oauth cannot be configured properly (#1196) * make admin configurable and make management configurable * spotless * Update CHANGELOG.md * Update CHANGELOG.md * fix the audit default status type (#1193) * fix the audit default status type * Update CHANGELOG.md --------- Co-authored-by: stefanspiska <stefan.spiska@vitagroup.ag> * fix party identified NP (#1191) * fix party identified NP * Update CHANGELOG.md * change to equals * spotless * update sdk (#1197) * handle IllegalArgumentException (#1198) * handle IllegalArgumentException * spotless * Bump jooq.version from 3.18.6 to 3.18.7 (#1199) Bumps `jooq.version` from 3.18.6 to 3.18.7. Updates `org.jooq:jooq` from 3.18.6 to 3.18.7 Updates `org.jooq:jooq-codegen-maven` from 3.18.6 to 3.18.7 --- updated-dependencies: - dependency-name: org.jooq:jooq dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.jooq:jooq-codegen-maven dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump io.micrometer:micrometer-registry-prometheus from 1.11.4 to 1.11.5 (#1200) Bumps [io.micrometer:micrometer-registry-prometheus](https://github.com/micrometer-metrics/micrometer) from 1.11.4 to 1.11.5. - [Release notes](https://github.com/micrometer-metrics/micrometer/releases) - [Commits](micrometer-metrics/micrometer@v1.11.4...v1.11.5) --- updated-dependencies: - dependency-name: io.micrometer:micrometer-registry-prometheus dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump commons-io:commons-io from 2.13.0 to 2.14.0 (#1192) Bumps commons-io:commons-io from 2.13.0 to 2.14.0. --- updated-dependencies: - dependency-name: commons-io:commons-io dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump spring-boot.version from 3.1.4 to 3.1.5 (#1202) Bumps `spring-boot.version` from 3.1.4 to 3.1.5. Updates `org.springframework.boot:spring-boot-dependencies` from 3.1.4 to 3.1.5 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.4...v3.1.5) Updates `org.springframework.boot:spring-boot-starter-logging` from 3.1.4 to 3.1.5 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.4...v3.1.5) Updates `org.springframework.boot:spring-boot-maven-plugin` from 3.1.4 to 3.1.5 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.4...v3.1.5) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump org.apache.logging.log4j:log4j-api from 2.20.0 to 2.21.0 (#1203) Bumps org.apache.logging.log4j:log4j-api from 2.20.0 to 2.21.0. --- updated-dependencies: - dependency-name: org.apache.logging.log4j:log4j-api dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Add explicit ant matcher wrappers in the auth security configs (#1210) * Add explicit ant matcher wrappers in the auth security configs * Apply spotless * Bump org.apache.maven.plugins:maven-dependency-plugin (#1207) Bumps [org.apache.maven.plugins:maven-dependency-plugin](https://github.com/apache/maven-dependency-plugin) from 3.6.0 to 3.6.1. - [Commits](apache/maven-dependency-plugin@maven-dependency-plugin-3.6.0...maven-dependency-plugin-3.6.1) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-dependency-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump org.apache.maven.plugins:maven-surefire-plugin from 3.1.2 to 3.2.1 (#1205) Bumps [org.apache.maven.plugins:maven-surefire-plugin](https://github.com/apache/maven-surefire) from 3.1.2 to 3.2.1. - [Release notes](https://github.com/apache/maven-surefire/releases) - [Commits](apache/maven-surefire@surefire-3.1.2...surefire-3.2.1) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-surefire-plugin dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump org.apache.logging.log4j:log4j-api from 2.21.0 to 2.21.1 (#1208) Bumps org.apache.logging.log4j:log4j-api from 2.21.0 to 2.21.1. --- updated-dependencies: - dependency-name: org.apache.logging.log4j:log4j-api dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump commons-io:commons-io from 2.14.0 to 2.15.0 (#1206) Bumps commons-io:commons-io from 2.14.0 to 2.15.0. --- updated-dependencies: - dependency-name: commons-io:commons-io dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump org.apache.maven.plugins:maven-failsafe-plugin from 3.1.2 to 3.2.1 (#1204) Bumps [org.apache.maven.plugins:maven-failsafe-plugin](https://github.com/apache/maven-surefire) from 3.1.2 to 3.2.1. - [Release notes](https://github.com/apache/maven-surefire/releases) - [Commits](apache/maven-surefire@surefire-3.1.2...surefire-3.2.1) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-failsafe-plugin dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Enabled management access type for basic auth as well (#62) * Enabled management access type for basic auth as well * Rename management endpoint access config * merge old --------- Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: Dmitry Tulba <tulbad1@gmail.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: Alex Vidrean <alex.vidrean@gmail.com> Co-authored-by: vinzenz.mueller <vinzenz.mueller@vitagroup.ag> Co-authored-by: bot <bot@ehrbase.org> Co-authored-by: MBA <michael.baumann@vitagroup.ag> Co-authored-by: vmueller-vg <100680528+vmueller-vg@users.noreply.github.com> Co-authored-by: vladislavploaia <vladislav.ploaia.ext@vitagroup.ag> Co-authored-by: vladislavploaia <100927963+vladislavploaia@users.noreply.github.com>
stefanspiska
added a commit
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Jan 29, 2024
* fix sonar (#59) * fix sonar * fix sonar * Remove non-existent sonar paths * Feature/merge old (#63) * add remove cascade for sys tenant foreign keys * Bump jooq.version from 3.18.4 to 3.18.5 (#1143) Bumps `jooq.version` from 3.18.4 to 3.18.5. Updates `jooq` from 3.18.4 to 3.18.5 Updates `jooq-codegen-maven` from 3.18.4 to 3.18.5 --- updated-dependencies: - dependency-name: org.jooq:jooq dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.jooq:jooq-codegen-maven dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump spring-boot.version from 2.7.12 to 2.7.13 (#1144) Bumps `spring-boot.version` from 2.7.12 to 2.7.13. Updates `spring-boot-dependencies` from 2.7.12 to 2.7.13 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.12...v2.7.13) Updates `spring-boot-starter-logging` from 2.7.12 to 2.7.13 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.12...v2.7.13) Updates `spring-boot-maven-plugin` from 2.7.12 to 2.7.13 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.12...v2.7.13) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Add example scope to OpenEHR template example endpoint * CDR-934 move AqlPath * add tenant deletion * update CHANGELOG.md * clean up * fix query & add stored query endpoint * fix query & add stored query endpoint * Bump micrometer-registry-prometheus from 1.11.1 to 1.11.2 (#1148) Bumps [micrometer-registry-prometheus](https://github.com/micrometer-metrics/micrometer) from 1.11.1 to 1.11.2. - [Release notes](https://github.com/micrometer-metrics/micrometer/releases) - [Commits](micrometer-metrics/micrometer@v1.11.1...v1.11.2) --- updated-dependencies: - dependency-name: io.micrometer:micrometer-registry-prometheus dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * cleanup & refactoring * cleanup * Bump spring-boot.version from 2.7.13 to 2.7.14 (#1154) Bumps `spring-boot.version` from 2.7.13 to 2.7.14. Updates `org.springframework.boot:spring-boot-dependencies` from 2.7.13 to 2.7.14 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.13...v2.7.14) Updates `org.springframework.boot:spring-boot-starter-logging` from 2.7.13 to 2.7.14 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.13...v2.7.14) Updates `org.springframework.boot:spring-boot-maven-plugin` from 2.7.13 to 2.7.14 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.13...v2.7.14) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * add audit directory (#1150) * add audit directory * audit delete directory * Update release workflow to use java 17 * Use setup java v3 in the release workflow * Remove unnecessary setup java from release workflow * Don't skip tests for sdk dev build * release 0.28.0: updated version to 0.28.0 * updated version to 0.29.0-SNAPSHOT * Feature/cdr 920 templates with same (#1158) * check if internal id works * fix & cleanup * cleanup * fix & cleanup * add tenant id comment * fix & cleanup * fix & cleanup * fix for non existing case * spotless * fix wrongly set parameter * fix & cleanup correct only for DefaultTenantAuthentication * Revert "fix & cleanup correct only for DefaultTenantAuthentication" This reverts commit 105cd60. * cleanup * Feature/cdr 1007 cleanup security context (#1159) * clean up security context * fix & cleanup correct only for DefaultTenantAuthentication * register an interceptor * add before filters & interceptor for auth-type when none * release 0.29.0: updated version to 0.29.0 * updated version to 0.30.0-SNAPSHOT * Bump org.apache.commons:commons-lang3 from 3.12.0 to 3.13.0 Bumps org.apache.commons:commons-lang3 from 3.12.0 to 3.13.0. --- updated-dependencies: - dependency-name: org.apache.commons:commons-lang3 dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> * fix the location * update CHANGELOG.md * XACML stuff * Add XACML auth for create ehr * Add XACML action and resource id * CDR-790 Add packaging as jar * Add tenant policy lookup to EHR Controller * Rebased on Dev * changed constraint name * Adapted to cdr-xaml-authorization-lib * Rebased on Dev * Remove libraries * Add missing import * Rename xacml url param for query controller * Change annotations order * Add AccessCtrlException handling * Add AccessCtrlException handling * Tmp. commit * Rebased on dev * Spotless * Tmp. commit * Revert "Tmp. commit" This reverts commit 5f070e4. * Removed all XACML/Security logic * Change mvn dependency * Changes XACML Impl. custom logic to handle the ehrbase external annotation which enforces xacml checks * cleanup * Rest endpoint instanciationis now surpressed by bean name * Review change * Update sonar orb to 2.0.0 * Bump jooq.version from 3.18.5 to 3.18.6 (#1162) Bumps `jooq.version` from 3.18.5 to 3.18.6. Updates `org.jooq:jooq` from 3.18.5 to 3.18.6 Updates `org.jooq:jooq-codegen-maven` from 3.18.5 to 3.18.6 --- updated-dependencies: - dependency-name: org.jooq:jooq dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.jooq:jooq-codegen-maven dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * CDR-941 Fix storing/reading attributes of Locatable.name (#1161) * CDR-941 Fix DvText.mappings and DvCodedText.defining_code.preferred_term not being stored for Locatable.name * Update CHANGELOG.md * Formatting * CDR-941 use snake case attribute names in /name to make them queryable via AQL * CDR-941 adjust test * CDR-941 Add migration script * add migration hint to updating.md * CDR-941 make migration optional + adjust UPDATING.md * Bump net.bull.javamelody:javamelody-spring-boot-starter (#1156) Bumps [net.bull.javamelody:javamelody-spring-boot-starter](https://github.com/javamelody/javamelody) from 1.94.0 to 1.95.0. - [Release notes](https://github.com/javamelody/javamelody/releases) - [Changelog](https://github.com/javamelody/javamelody/blob/master/javamelody-release.cmd) - [Commits](javamelody/javamelody@javamelody-core-1.94.0...javamelody-core-1.95.0) --- updated-dependencies: - dependency-name: net.bull.javamelody:javamelody-spring-boot-starter dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * release 0.30.0: updated version to 0.30.0 * updated version to 0.31.0-SNAPSHOT * Bump io.micrometer:micrometer-registry-prometheus from 1.11.2 to 1.11.3 (#1167) Bumps [io.micrometer:micrometer-registry-prometheus](https://github.com/micrometer-metrics/micrometer) from 1.11.2 to 1.11.3. - [Release notes](https://github.com/micrometer-metrics/micrometer/releases) - [Commits](micrometer-metrics/micrometer@v1.11.2...v1.11.3) --- updated-dependencies: - dependency-name: io.micrometer:micrometer-registry-prometheus dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Remove commented security.authType * Add changelog documentation * Fixed changelog file for version 0.30.0 * Bump spring-boot.version from 2.7.14 to 2.7.15 (#1171) Bumps `spring-boot.version` from 2.7.14 to 2.7.15. Updates `org.springframework.boot:spring-boot-dependencies` from 2.7.14 to 2.7.15 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.14...v2.7.15) Updates `org.springframework.boot:spring-boot-starter-logging` from 2.7.14 to 2.7.15 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.14...v2.7.15) Updates `org.springframework.boot:spring-boot-maven-plugin` from 2.7.14 to 2.7.15 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v2.7.14...v2.7.15) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump org.apache.maven.plugins:maven-enforcer-plugin from 3.3.0 to 3.4.0 (#1170) Bumps [org.apache.maven.plugins:maven-enforcer-plugin](https://github.com/apache/maven-enforcer) from 3.3.0 to 3.4.0. - [Release notes](https://github.com/apache/maven-enforcer/releases) - [Commits](apache/maven-enforcer@enforcer-3.3.0...enforcer-3.4.0) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-enforcer-plugin dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Update GitHub actions to latest versions (#1172) * Update GitHub actions to latest versions * Add dependabot support for github-actions * Update CHANGELOG.md Fix typo * Feature/cdr 1037 spring boot3 (#1174) * migrate to sporing boot 3 * downgrade jbx implementation * disable auth * update auth * exclude commons-logging * match trailing slash * update basic auth * code cleanup * fix: trigger CircleCI * fix: trigger CircleCI * update changelog * code cleanup --------- Co-authored-by: vladislavploaia <vladislav.ploaia.ext@vitagroup.ag> * add language as default (#1166) * Bump spring-boot.version from 3.1.1 to 3.1.3 (#1177) Bumps `spring-boot.version` from 3.1.1 to 3.1.3. Updates `org.springframework.boot:spring-boot-dependencies` from 3.1.1 to 3.1.3 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.1...v3.1.3) Updates `org.springframework.boot:spring-boot-starter-logging` from 3.1.1 to 3.1.3 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.1...v3.1.3) Updates `org.springframework.boot:spring-boot-maven-plugin` from 3.1.1 to 3.1.3 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.1...v3.1.3) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump org.apache.maven.plugins:maven-enforcer-plugin from 3.4.0 to 3.4.1 (#1178) Bumps [org.apache.maven.plugins:maven-enforcer-plugin](https://github.com/apache/maven-enforcer) from 3.4.0 to 3.4.1. - [Release notes](https://github.com/apache/maven-enforcer/releases) - [Commits](apache/maven-enforcer@enforcer-3.4.0...enforcer-3.4.1) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-enforcer-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump actions/checkout from 3 to 4 (#1176) Bumps [actions/checkout](https://github.com/actions/checkout) from 3 to 4. - [Release notes](https://github.com/actions/checkout/releases) - [Changelog](https://github.com/actions/checkout/blob/main/CHANGELOG.md) - [Commits](actions/checkout@v3...v4) --- updated-dependencies: - dependency-name: actions/checkout dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Enabled swagger ui working with Spring Boot 3 * Bump io.micrometer:micrometer-registry-prometheus from 1.11.3 to 1.11.4 (#1184) Bumps [io.micrometer:micrometer-registry-prometheus](https://github.com/micrometer-metrics/micrometer) from 1.11.3 to 1.11.4. - [Release notes](https://github.com/micrometer-metrics/micrometer/releases) - [Commits](micrometer-metrics/micrometer@v1.11.3...v1.11.4) --- updated-dependencies: - dependency-name: io.micrometer:micrometer-registry-prometheus dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/build-push-action from 4 to 5 (#1182) Bumps [docker/build-push-action](https://github.com/docker/build-push-action) from 4 to 5. - [Release notes](https://github.com/docker/build-push-action/releases) - [Commits](docker/build-push-action@v4...v5) --- updated-dependencies: - dependency-name: docker/build-push-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/setup-buildx-action from 2 to 3 (#1181) Bumps [docker/setup-buildx-action](https://github.com/docker/setup-buildx-action) from 2 to 3. - [Release notes](https://github.com/docker/setup-buildx-action/releases) - [Commits](docker/setup-buildx-action@v2...v3) --- updated-dependencies: - dependency-name: docker/setup-buildx-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump docker/login-action from 2 to 3 (#1183) Bumps [docker/login-action](https://github.com/docker/login-action) from 2 to 3. - [Release notes](https://github.com/docker/login-action/releases) - [Commits](docker/login-action@v2...v3) --- updated-dependencies: - dependency-name: docker/login-action dependency-type: direct:production update-type: version-update:semver-major ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Add plugin path to sonar-project.properties (#1180) * Bump spring-boot.version from 3.1.3 to 3.1.4 (#1187) Bumps `spring-boot.version` from 3.1.3 to 3.1.4. Updates `org.springframework.boot:spring-boot-dependencies` from 3.1.3 to 3.1.4 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.3...v3.1.4) Updates `org.springframework.boot:spring-boot-starter-logging` from 3.1.3 to 3.1.4 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.3...v3.1.4) Updates `org.springframework.boot:spring-boot-maven-plugin` from 3.1.3 to 3.1.4 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.3...v3.1.4) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * code cleanup (#1188) * Feature/pmk 251 (#1190) * change github action * fix AqlRoutines * inline parmeters * remove unnecessary DSL.field * fix order by * fix func build * fix review * Revert "change github action" This reverts commit 90714d9. * Changelog for #1190 --------- Co-authored-by: Alex Vidrean <alex.vidrean@gmail.com> * release 0.31.0: updated version to 0.31.0 * updated version to 0.32.0-SNAPSHOT * feat: cdr-1068 enable Robot STORED QUERY test suite in CIRCLE CI (#1195) * Bugfix/cdr 1078 oauth cannot be configured properly (#1196) * make admin configurable and make management configurable * spotless * Update CHANGELOG.md * Update CHANGELOG.md * fix the audit default status type (#1193) * fix the audit default status type * Update CHANGELOG.md --------- Co-authored-by: stefanspiska <stefan.spiska@vitagroup.ag> * fix party identified NP (#1191) * fix party identified NP * Update CHANGELOG.md * change to equals * spotless * update sdk (#1197) * handle IllegalArgumentException (#1198) * handle IllegalArgumentException * spotless * Bump jooq.version from 3.18.6 to 3.18.7 (#1199) Bumps `jooq.version` from 3.18.6 to 3.18.7. Updates `org.jooq:jooq` from 3.18.6 to 3.18.7 Updates `org.jooq:jooq-codegen-maven` from 3.18.6 to 3.18.7 --- updated-dependencies: - dependency-name: org.jooq:jooq dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.jooq:jooq-codegen-maven dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump io.micrometer:micrometer-registry-prometheus from 1.11.4 to 1.11.5 (#1200) Bumps [io.micrometer:micrometer-registry-prometheus](https://github.com/micrometer-metrics/micrometer) from 1.11.4 to 1.11.5. - [Release notes](https://github.com/micrometer-metrics/micrometer/releases) - [Commits](micrometer-metrics/micrometer@v1.11.4...v1.11.5) --- updated-dependencies: - dependency-name: io.micrometer:micrometer-registry-prometheus dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump commons-io:commons-io from 2.13.0 to 2.14.0 (#1192) Bumps commons-io:commons-io from 2.13.0 to 2.14.0. --- updated-dependencies: - dependency-name: commons-io:commons-io dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump spring-boot.version from 3.1.4 to 3.1.5 (#1202) Bumps `spring-boot.version` from 3.1.4 to 3.1.5. Updates `org.springframework.boot:spring-boot-dependencies` from 3.1.4 to 3.1.5 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.4...v3.1.5) Updates `org.springframework.boot:spring-boot-starter-logging` from 3.1.4 to 3.1.5 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.4...v3.1.5) Updates `org.springframework.boot:spring-boot-maven-plugin` from 3.1.4 to 3.1.5 - [Release notes](https://github.com/spring-projects/spring-boot/releases) - [Commits](spring-projects/spring-boot@v3.1.4...v3.1.5) --- updated-dependencies: - dependency-name: org.springframework.boot:spring-boot-dependencies dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-starter-logging dependency-type: direct:production update-type: version-update:semver-patch - dependency-name: org.springframework.boot:spring-boot-maven-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump org.apache.logging.log4j:log4j-api from 2.20.0 to 2.21.0 (#1203) Bumps org.apache.logging.log4j:log4j-api from 2.20.0 to 2.21.0. --- updated-dependencies: - dependency-name: org.apache.logging.log4j:log4j-api dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Add explicit ant matcher wrappers in the auth security configs (#1210) * Add explicit ant matcher wrappers in the auth security configs * Apply spotless * Bump org.apache.maven.plugins:maven-dependency-plugin (#1207) Bumps [org.apache.maven.plugins:maven-dependency-plugin](https://github.com/apache/maven-dependency-plugin) from 3.6.0 to 3.6.1. - [Commits](apache/maven-dependency-plugin@maven-dependency-plugin-3.6.0...maven-dependency-plugin-3.6.1) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-dependency-plugin dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump org.apache.maven.plugins:maven-surefire-plugin from 3.1.2 to 3.2.1 (#1205) Bumps [org.apache.maven.plugins:maven-surefire-plugin](https://github.com/apache/maven-surefire) from 3.1.2 to 3.2.1. - [Release notes](https://github.com/apache/maven-surefire/releases) - [Commits](apache/maven-surefire@surefire-3.1.2...surefire-3.2.1) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-surefire-plugin dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump org.apache.logging.log4j:log4j-api from 2.21.0 to 2.21.1 (#1208) Bumps org.apache.logging.log4j:log4j-api from 2.21.0 to 2.21.1. --- updated-dependencies: - dependency-name: org.apache.logging.log4j:log4j-api dependency-type: direct:production update-type: version-update:semver-patch ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump commons-io:commons-io from 2.14.0 to 2.15.0 (#1206) Bumps commons-io:commons-io from 2.14.0 to 2.15.0. --- updated-dependencies: - dependency-name: commons-io:commons-io dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Bump org.apache.maven.plugins:maven-failsafe-plugin from 3.1.2 to 3.2.1 (#1204) Bumps [org.apache.maven.plugins:maven-failsafe-plugin](https://github.com/apache/maven-surefire) from 3.1.2 to 3.2.1. - [Release notes](https://github.com/apache/maven-surefire/releases) - [Commits](apache/maven-surefire@surefire-3.1.2...surefire-3.2.1) --- updated-dependencies: - dependency-name: org.apache.maven.plugins:maven-failsafe-plugin dependency-type: direct:production update-type: version-update:semver-minor ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Enabled management access type for basic auth as well (#62) * Enabled management access type for basic auth as well * Rename management endpoint access config * merge old --------- Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: Dmitry Tulba <tulbad1@gmail.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: Alex Vidrean <alex.vidrean@gmail.com> Co-authored-by: vinzenz.mueller <vinzenz.mueller@vitagroup.ag> Co-authored-by: bot <bot@ehrbase.org> Co-authored-by: MBA <michael.baumann@vitagroup.ag> Co-authored-by: vmueller-vg <100680528+vmueller-vg@users.noreply.github.com> Co-authored-by: vladislavploaia <vladislav.ploaia.ext@vitagroup.ag> Co-authored-by: vladislavploaia <100927963+vladislavploaia@users.noreply.github.com> * run build also on release branches --------- Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: Alex Vidrean <alex.vidrean@gmail.com> Co-authored-by: Dmitry Tulba <tulbad1@gmail.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: vinzenz.mueller <vinzenz.mueller@vitagroup.ag> Co-authored-by: bot <bot@ehrbase.org> Co-authored-by: MBA <michael.baumann@vitagroup.ag> Co-authored-by: vmueller-vg <100680528+vmueller-vg@users.noreply.github.com> Co-authored-by: vladislavploaia <vladislav.ploaia.ext@vitagroup.ag> Co-authored-by: vladislavploaia <100927963+vladislavploaia@users.noreply.github.com>
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