It is a pleasure to announce that the Western Slicer Project Week will be held in London, Ontario, Canada on July 17-21, 2017. This is the first extension Slicer project week that grew organically from a proposed visit of Dr. Nobuhiko Hata to Western. Enough interest existed to propose a small Slicer hackfest, which quickly grew into a full blown project week. With the expansion of the hackfest into a full project week, an additional meeting was arranged in conjunction with SPWW to discuss and develop image-guided therapy specific goals. Thus, this is also the inaugural Slicer IGT Project Week. This project week is an event endorsed by the MICCAI Society.
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Host: Terry Peters, Robarts Scientist; Professor Medical Imaging; Medical Biophysics; Biomedical Engineering
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Email Local Organizing Committee:
This is a collection of resources submitted by attendees
- Welcome presentation by Andras Lasso
- Historical overview by Nobuhiko Hata
- Python resources (thanks John Drozd!)
- What?
- When, where, how much?
- How does it work?
- Who can attend?
- Who should attend?
- What else?
- Who to contact?
See projects details at VASST website.
- Enabling virtual reality (OpenVR) for Slicer (Adam Rankin)
- Identifying angiosomes in the lower leg (Michael Schumaker, Andrei Mouraviev, Edward Ntiri)
- 3D Anatomical Segmentation to Improve Gross Anatomy (Steven Lewis) Automated Segmentation of the human skull, face and airways from MRI dicom images (John Drozd)
- Module for computing Laplace field over a volume of interest (Jordan DeKraker)
- Sigmoid Sinus Segmentation (Daniel Allen, Brad Gare, Clara Tam)
- Auto-segmentation of the uterus in 3D-slicer and bridge to MATLAB (Nadeem Naim)
- Vertebral Body Segmentation and Object recognition using Deep Learning Networks (Michael Hardisty)
- Python Phantom Segmentation Script (Colin McCurdy)
- Automating semi-automatic ventricle segmentation algorithm (Nuwan Nanayakkara)
- Prostate Imaging Reporting (Nicole Aucoin, Nobuhiko Hata)
- Integration of 3D Slicer and ROS (Junichi Tokuda)
- AR-ultrasound module (Goli Ameri, Adam Rankin)
- 4D Registration (Feng Su, Claire Vannelli, Mohamed Moselhy)
- Hand-Eye Calibration Module (Isabella Morgan, Elvis Chen)
- Ex-vivo to in-vivo Registration Procedure (Geetika Gupta)
- Image Quizzer (Carol Johnson)
- Calculating LVEF (Ben Wilk)
- sEEG Visuallization (Kristin Ikeda)
- CIFTI File Integration Module (Hossein Rejali)
- Dataprobe for models in the 3D viewer (Jason Kai)
- 3D Slicer introduction
- 3D Slicer features overview (Andras Lasso)
- Segmentation
- Segment editor tutorials (video tutorial and slides)
- Segment editor reference manual
- Slicelets
- Customizing 3D Slicer: slicelets/guidelets (Andras Lasso)
- Slicer programming tutorial
- VASST Lab Slicelet Template (Thanks Ying Li!)
- SlicerIGT
- PerkLab videos
- Isabella Morgan (Robarts Research Institute)
- Golafsoun Ameri (Robarts Research Institute)
- Uditha Jayarathne (Robarts Research Institute)
- Adam Rankin (Robarts Research Institute)
- Jonathan Lau (Robarts Research Institute)
- Saeed Bakhshmand (CSTAR)
- Serene Abu-Sardanah (Robarts Research Institute)
- Greydon Gilmore (University Hospital)
- John Drozd (Western University)
- Feng Su (Robarts Research Institute)
- Daniel Allen (University of Western Ontario)
- Hossein Rejali (Robarts Research Institute)
- Geetika Gupta (Robarts Research Institute)
- Kristin Ikeda (Western University)
- Kayla Ferko (Western University)
- Jason Kai (Western University)
- Claire Vannelli (Robarts Research Institute)
- Andrew Westcott (Western University)
- Brian Wang (Khan Lab)
- Clara Tam (Western University)
- Loxlan Kasa (Robarts Research Institute)
- Carol Johnson (Baines Imaging Laboratory)
- Benjamin Wilk (Lawson Imaging)
- Andrei Mouraviev (University of Toronto)
- Ali Khan (Western University)
- Colin McCurdy (Western University)
- Reid Vassallo (Robarts Research Institute)
- John Demarco (Robarts Research Institute)
- Michael Schumaker (Sunnybrook Research Institute)
- Erin Iredale (Western University)
- Nobuhiko Hata (Brigham and Women's Hospital and Harvard Medical School)
- Nicole Aucoin (Harmonus Inc)
- Brian Ninni (Surgical Planning Lab)
- Andras Lasso (Queen's PerkLab)
- Franklin King (Brigham and Women's Hospital)
- Brad Gare (Western University)
- Steven Lewis (University at Buffalo)
- YingLi Lu (Robarts Research Institute)
- Nuwan Nanayakkara (Robarts Research Institute)
- Hassan Haddad (The University of Western Ontario)
- Junichi Tokuda (Brigham and Women's Hospital)
- Jordan DeKraker (University of Western Ontario)
- Khalid Abdalla (University of Western Ontario)
- Deepak Toor (Robarts Research Institute)
- Justin Michael (Robarts Research Institute)
- Jessica Rodgers (Robarts Research Institute)
- Terry Peters (Robarts Research Institute)
- Mohamed Moselhy Email (McKenzie Lab)
- Nadeem Naim (Mckenzie Lab)
- Edward Ntiri (Sunnybrook Research Institute)
- Helium Mak (Western University)
- Qi Qi (Lawson Imaging)
- Arefin Shamsil (CSTAR)
- Stewart McLachlin (University of Waterloo)
- Michael Hardisty (Sunnybrook Research Institute)
- Wenyao Xia (Western University)
- John Baxter (Robarts Research Institute)
- Jean-Christophe Fillion-Robin (Kitware Inc.)