I'm a Postdoctoral Scientist at the Gloucester Marine Genomics Institute. I completed my Ph.D. in Biological and Environmental Sciences with Dr. Hollie Putnam at the University of Rhode Island. My dissertation research investigated the effects of environmental stimuli (e.g., elevated temperature and pCO2) on organismal multivariate physiological and genomic state.
View my CV, Google Scholar page, and other links on my LinkTree here. My open source laboratory notebook from my time at the Putnam Lab can be found here: PhD open lab notebook and my current laboratory notebook from GMGI can be found here: GMGI open lab notebook.
Chapter 1: Coral species loss and physiological legacy effects are elicited by extended marine heatwave and projected ocean acidification conditions. Github repository
Chapter 2: Coral host and Symbiodiniaceae epigenetic and gene expression patterns under thermal and ocean acidification stress. Github repository
Chapter 3: Epigenetic mechanisms and symbiont communities underlying tolerant and non-tolerant phenotypes in coral. Github repository
DNA Methylation analysis workflows: link
Genome functional annotation workflow: link
Gene Expression RNASeq workflow: link
16S Microbial analysis workflows: link
ITS2 Symbiont community analysis workflow: link