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Handle 'withdrawn' items better #16

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tseemann opened this issue Jul 1, 2017 · 2 comments
Closed

Handle 'withdrawn' items better #16

tseemann opened this issue Jul 1, 2017 · 2 comments

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@tseemann
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tseemann commented Jul 1, 2017

I wrote this tutorial last year:
https://github.com/ngs-docs/angus/blob/2017/kraken_species_identification.rst

So i tried to use your tool to download it.

enaDataGet -f fastq SRR2423672
ERROR: Something unexpected went wrong please try again.
If problem persists, please contact datasubs@ebi.ac.uk for assistance.

Now it turns out the entry used to exist, but was withdrawn:

Run: SRR2423672 has been removed at the submitter's request.
See: http://www.ebi.ac.uk/ena/data/view/SRR2423672

Are you able to catch this situation better and inform the user?

@nicsilvester
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It should be saying record not available. I'll check why this didn't happen. Thanks for the heads up

@nicsilvester
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Fixed in release v1.3.1

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