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The University of Melbourne
- Melbourne, AUSTRALIA
⚡️ ♒️Rapid prokaryotic genome annotation
✂️ ⚡️Rapid bacterial SNP calling and core genome alignments
💾 📃"Reads to report" for public health and clinical microbiology
🔬 ♌️Bacterial ribosomal RNA predictor
🔎 💊Mass screening of contigs for antimicrobial and virulence genes
🆔Scan contig files against PubMLST typing schemes
955 contributions in the last year
I removed the
fasttree as it is now the default on the brew recipe.
fx2tab seems to be about 4 times slower than shell commands. Is that expected?
$ time (zcat R1_001.fastq.gz | paste - - - - | cut -f 1,2,4 > /dev/n…