Block or report user

Report or block tseemann

Hide content and notifications from this user.

Contact Support about this user’s behavior.

Report abuse



Pinned repositories

  1. prokka

    ⚡️ ♒️ Rapid prokaryotic genome annotation

    Perl 178 87

  2. snippy

    ✂️ ⚡️ Rapid haploid variant calling and core genome alignment

    Perl 90 24

  3. shovill

    Faster SPAdes assembly of Illumina reads

    Perl 66 11

  4. abricate

    🔎 💊 Mass screening of contigs for antimicrobial and virulence genes

    Perl 58 12

  5. nullarbor

    💾 📃 "Reads to report" for public health and clinical microbiology

    Perl 54 14

  6. mlst

    🆔 Scan contig files against PubMLST typing schemes

    Perl 38 11

1,948 contributions in the last year

Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep Oct Mon Wed Fri

Contribution activity

October 2018

Created a pull request in brewsci/homebrew-bio that received 25 comments

gemma 0.98 [torsten]

Have you followed the guidelines for contributing? Have you checked that there aren't other open pull requests for the same formula update/change?

+32 −0 25 comments

Created an issue in bcgsc/ntCard that received 12 comments

Speed doesn't change when --threads increases?

This is on a FASTQ file with Reads 1859724 Yield 274758053 for N in $(seq 1 18); do echo threads=$N && ntcard -t $N -k 25 -p ntcard$N R1.fq.gz ; do…


Seeing something unexpected? Take a look at the GitHub profile guide.