Synopsis
This is the XML beans for the SRA XML Schemas
https://github.com/EMBL-EBI-SUBS/subs-data
- Create a branch for the new changes
git checkout -b <branch_name> - Update the version number in
build.gradle - Update the relevant schema in the following folder and commit it
src/main/resources/uk/ac/ebi/ena - Generate and commit a new test case for the schema change in
src/test/java/uk/ac/ebi/ena/sra/xml/ gradlew clean install( if you are developing and testing locally)- Merge your changes with master
- Tag the new version number in git
- Draft a new release with proper release notes and publish https://github.com/enasequence/schema/releases
- More information about release can be found here: https://help.github.com/articles/creating-releases/
gradlew publish(will upload to EBI Gitlab).
- Copy all XSD files in the directory main/resources/uk/ac/ebi/ena/sra/schema to
/nfs/ftp/pub/databases/ena/doc/xsd/sra_1_5 - This directory can be accessed :
$ ssh codon-login$ bsub -Is -q datamover bash$ become datalib$ cd /nfs/ftp/pub/databases/ena/doc/xsd/sra_1_5
NOTE : There are multiple sra_1_X directories inside parent directory /nfs/ftp/pub/databases/ena/doc/xsd. The files,
however, are always copied into sra_1_5 unless explicitly stated otherwise.