Remove org.bouncycastle dependency

[Akirathan]

Fixes #8362

Pull Request Description

Remove the org.bouncycastle dependency from org.enso.runtime module.

Important Notes

• Digest computation is done with JDK classes instead of org.bouncycastle.

Checklist

Please ensure that the following checklist has been satisfied before submitting the PR:

• Manually run engine benchmarks and ensure that the performance of startup benchmarks is back to its previous value before Add graalpy packages to the component directory #8351
• The documentation has been updated, if necessary.
• All code has been tested:
  • Unit tests have been written where possible.

[Akirathan]

Engine benchmarks scheduled at https://github.com/enso-org/enso/actions/runs/7400828290

stdlib benchmarks scheduled at https://github.com/enso-org/enso/actions/runs/7400834645

GitHub

Benchmark Engine · enso-org/enso@b85d5e5

Hybrid visual and textual functional programming. Contribute to enso-org/enso development by creating an account on GitHub.

GitHub

Benchmark Standard Libraries · enso-org/enso@b85d5e5

Hybrid visual and textual functional programming. Contribute to enso-org/enso development by creating an account on GitHub.

[JaroslavTulach]

stdlib benchmarks scheduled at https://github.com/enso-org/enso/actions/runs/7400834645

There is a failure related to bouncycastle:

running (fork) org.enso.benchmarks.libs.LibBenchRunner 
Error occurred during initialization of boot layer
java.lang.LayerInstantiationException: Package org.bouncycastle.tsp.ers in both module 
  org.enso.runtime and module org.bouncycastle.pkix
 (std-benchmarks / Bench / run) Nonzero exit code returned from runner: 1

GitHub

Benchmark Standard Libraries · enso-org/enso@b85d5e5

Hybrid visual and textual functional programming. Contribute to enso-org/enso development by creating an account on GitHub.

[Akirathan]

There is a failure related to bouncycastle:

This is because of the incremental builds. Let me clean all the runners and reschedule that job again.

[Akirathan]

Another attempt of std-lib benchmarks started at https://github.com/enso-org/enso/actions/runs/7408255173

GitHub

Benchmark Standard Libraries · enso-org/enso@b85d5e5

Hybrid visual and textual functional programming. Contribute to enso-org/enso development by creating an account on GitHub.

[Akirathan]

Another attempt of std-lib benchmarks started at enso-org/enso/actions/runs/7408255173

GitHub**Benchmark Standard Libraries · enso-org/enso@b85d5e5**Hybrid visual and textual functional programming. Contribute to enso-org/enso development by creating an account on GitHub.

Looking at the bench comparison at generated_site.zip, removing org.bouncycastle dependency from org.enso.runtime does not help in org_enso_benchmarks_generated_Startup_empty_startup.

Engine benchmarks are the same.

[Akirathan]

Although removing org.bouncycastle dependency did not help with the benchmarks, it is still valuable. Let's merge this PR now, and continue with the startup slowdown investigation in another PR.