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SMILES import: general chiral specification labels (TH, AL, SP, TB, OH ) don't work #1036

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Zhirnoff opened this issue Feb 15, 2023 · 1 comment · Fixed by #1127
Closed

SMILES import: general chiral specification labels (TH, AL, SP, TB, OH ) don't work #1036

Zhirnoff opened this issue Feb 15, 2023 · 1 comment · Fixed by #1127
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@even1024
Labels
Bug Priority: High
Projects
Indigo
Milestone
Indigo-1.12.0-rc.1

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@Zhirnoff
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Zhirnoff commented Feb 15, 2023 •
edited

Steps to Reproduce

  1. Open Ketcher
  2. Press 'Open'-> 'Paste from Clipboard'
  3. Paste string F[Po@SP2](Br)(Cl)I

Expected behavior
Structure renders correctly, with an 'Po' atom in the middle
2023-02-15_18h07_26

Actual behavior
Structure renders is incorrectly, with an 'F2' atom in the middle
2023-04-13_13h38_33

Attachments

2023-02-15_17h58_30.mp4

Indigo/Bingo version
Indigo Toolkit
Version 1.10.0-rc.3.0-g8e56c89e5-x86_64-linux-gnu-11.2.1

#184227917
@Zhirnoff Zhirnoff added the Bug label Feb 15, 2023
@Zhirnoff Zhirnoff added this to the Refined Backlog milestone Feb 15, 2023
@Zhirnoff Zhirnoff added this to Product Backlog in Indigo via automation Feb 15, 2023
@even1024 even1024 moved this from Product Backlog to In progress in Indigo May 3, 2023
@even1024 even1024 moved this from In progress to Done in Indigo May 5, 2023
@even1024 even1024 linked a pull request May 5, 2023 that will close this issue
#1036 SMILES import: general chiral specification labels (TH, AL, SP, TB, OH ) don't work #1127
Merged
@even1024 even1024 changed the title SMILES import: Structure renders incorrectly SMILES import: general chiral specification labels (TH, AL, SP, TB, OH ) don't work May 11, 2023
@even1024
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Full general chiral specification will be supported here:
#1129

AlexanderSavelyev pushed a commit that referenced this issue May 11, 2023
@even1024
#1036 SMILES import: general chiral specification labels (TH, AL, SP,…
0557e66 
… TB, OH ) don't work (#1127)
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Assignees

@even1024 even1024

Labels
Bug Priority: High
Projects
Indigo
  
Done
Milestone
Indigo-1.12.0-rc.1
3 participants
@even1024 @AlexeyGirin @Zhirnoff