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Achievement: Arctic Code Vault ContributorAchievement: Starstruckx2Achievement: Pull Sharkx2
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  1. flatironinstitute/CaImAn-MATLAB flatironinstitute/CaImAn-MATLAB Public

    Complete Matlab pipeline for large scale calcium imaging data analysis

    MATLAB 247 146

  2. flatironinstitute/CaImAn flatironinstitute/CaImAn Public

    Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike deconvolution and result visualization.

    Python 612 361

  3. flatironinstitute/NoRMCorre flatironinstitute/NoRMCorre Public

    Matlab routines for online non-rigid motion correction of calcium imaging data

    MATLAB 135 84

  4. continuous_time_ca_sampler continuous_time_ca_sampler Public

    The code takes as an input a time series vector of calcium observationsand produces samples from the posterior distribution of the underlying spike in continuous time.

    MATLAB 19 13