test #3
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dpryan79
pushed a commit
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this issue
Sep 22, 2019
* First attempt at a recipe for PhyloCSF * Reset build number to 0; Added basic test; Added license (CLI round 1 errors) * Lowercased package name (CLI round 2) * changed folder name to match package name (CLI round 3) * Added manual download and compiling of Opam * Added wget as requirement * Added opam setup step * Attempt to fix opam install process: added unzip and glpk dependencies, build without sandboxing * test with g++ instead of gcc * Fix attempt for missing solver * Second attempt at c++ compiler * Added messages for better debugging * Attempt to change opam install mode to binaries * It works locally now ... * Forgot to revert curl to wget ... * Added -y option to opam install * Fix attempt for OCaml package compiling bugs * Second fix attempt for OCaml package compiling bugs * Debugging gsl-conf + see if I can remove some dependencies * Debugging gsl-conf #2 * Debugging gsl-conf #3 * Debugging gsl-conf #4 * Debugging gsl-conf #5 * Debugging gsl-conf #5 * Debugging gsl-conf #6 * Cleaned up, small test * Checking output from pkg-config gsl * Checking output from pkg-config gsl - 2 * Checking output from pkg-config gsl - 3 * Test with pkg-config * Testing pkgconfig path + removed exporting ld path * More pkg-config testing * More pkg-config testing * More pkg-config testing * More pkg-config testing * Testing after candidate fixs * Cleaned up recipe after successful tests for GSL, added ocamlfind package to opam * Updated PhyloCSF archive to new release that fixes makefile for new compilers * Cleanup, candidate for final recipe 1 * Added gsl to runtime to fix missing gsl shared library in tests * Removed the accidental 0 that I added at the end of build.sh ... * Added test files to source_files in metal.yaml test section * Manually moved file required for test in bin, less clean but otherwise mulled-build fails as test file is missing * woops * Fix attempt for test file * Removed test as it required a file and failed in mulled-build since the file was not present * I don't know why tests are failing * Removed test at the moment * First attempt at implementing tests properly * Second attempt at implementing tests properly * Updated test * Trying to understand testing environment * Test with * Test with 2 * Test with PREFIX 3 * Tentative fix to build on OSX * First attempt at a recipe for PhyloCSF * Reset build number to 0; Added basic test; Added license (CLI round 1 errors) * Lowercased package name (CLI round 2) * changed folder name to match package name (CLI round 3) * Added manual download and compiling of Opam * Added wget as requirement * Added opam setup step * Attempt to fix opam install process: added unzip and glpk dependencies, build without sandboxing * test with g++ instead of gcc * Fix attempt for missing solver * Second attempt at c++ compiler * Added messages for better debugging * Attempt to change opam install mode to binaries * It works locally now ... * Forgot to revert curl to wget ... * Added -y option to opam install * Fix attempt for OCaml package compiling bugs * Second fix attempt for OCaml package compiling bugs * Debugging gsl-conf + see if I can remove some dependencies * Debugging gsl-conf #2 * Debugging gsl-conf #3 * Debugging gsl-conf #4 * Debugging gsl-conf #5 * Debugging gsl-conf #5 * Debugging gsl-conf #6 * Cleaned up, small test * Checking output from pkg-config gsl * Checking output from pkg-config gsl - 2 * Checking output from pkg-config gsl - 3 * Test with pkg-config * Testing pkgconfig path + removed exporting ld path * More pkg-config testing * More pkg-config testing * More pkg-config testing * More pkg-config testing * Testing after candidate fixs * Cleaned up recipe after successful tests for GSL, added ocamlfind package to opam * Updated PhyloCSF archive to new release that fixes makefile for new compilers * Cleanup, candidate for final recipe 1 * Added gsl to runtime to fix missing gsl shared library in tests * Removed the accidental 0 that I added at the end of build.sh ... * Added test files to source_files in metal.yaml test section * Manually moved file required for test in bin, less clean but otherwise mulled-build fails as test file is missing * woops * Fix attempt for test file * Removed test as it required a file and failed in mulled-build since the file was not present * I don't know why tests are failing * Removed test at the moment * First attempt at implementing tests properly * Second attempt at implementing tests properly * Updated test * Trying to understand testing environment * Test with * Test with 2 * Test with PREFIX 3 * Tentative fix to build on OSX * Update meta.yaml
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