Convert genetic variants to minimal representation
Python Shell R
Switch branches/tags
Nothing to show
Clone or download
Pull request Compare This branch is 33 commits ahead, 1 commit behind xbrowse:master.
ericminikel Merge pull request #1 from kristjaneerik/upper-ref
Cast `true_ref` to upper and be less verbose
Latest commit 1e33a82 Dec 9, 2017

Convert variants at multi-allelic sites to their 'minimal representation', i.e. how they would be represented if they were the only allele present at the site.

This was forked from xBrowse and will eventually be integrated back in.

See explanation of this code and important use cases in this blog post.