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Publications - rearranged year to be next to title
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ericmjl committed Jan 3, 2020
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Expand Up @@ -233,68 +233,68 @@ <h2><i class="fa fa-bookmark"></i> Publications</h2>
<ul class="list-group">

<li class="list-group-item">
<p>pyjanitor: A Cleaner API for Cleaning Data. <a href="https://pdfs.semanticscholar.org/7b96/42a31f805a7c9584b2e6f6b08576a1e029f7.pdf">[link]</a></p>
<small><i>Proceedings of the 18th Python in Science Conference (SciPy 2019)</i>, (2019)</small>
<p>pyjanitor: A Cleaner API for Cleaning Data (2019)</p>
<small><a href="https://pdfs.semanticscholar.org/7b96/42a31f805a7c9584b2e6f6b08576a1e029f7.pdf"><i>Proceedings of the 18th Python in Science Conference (SciPy 2019)</i></a></small>
</li>

<li class="list-group-item">
<p>Peax: Interactive Visual Pattern Search in Sequential Data Using Unsupervised Deep Representation Learning. <a href="https://www.biorxiv.org/content/10.1101/597518v2">[link]</a></p>
<small><i>BioRXiv</i>, (2019)</small>
<p>Peax: Interactive Visual Pattern Search in Sequential Data Using Unsupervised Deep Representation Learning (2019)</p>
<small><a href="https://www.biorxiv.org/content/10.1101/597518v2"><i>BioRXiv</i></a></small>
</li>

<li class="list-group-item">
<p>Long-term colonization dynamics of Enterococcus faecalis in implanted devices in research macaques. <a href="https://aem.asm.org/content/early/2018/07/09/AEM.01336-18">[link]</a></p>
<small><i>Applied and Environmental Microbiology</i>, (2018)</small>
<p>Long-term colonization dynamics of Enterococcus faecalis in implanted devices in research macaques (2018)</p>
<small><a href="https://aem.asm.org/content/early/2018/07/09/AEM.01336-18"><i>Applied and Environmental Microbiology</i></a></small>
</li>

<li class="list-group-item">
<p>Evaluation of 6 Methods for Aerobic Bacterial Sanitization of Smartphones. <a href="https://www.ingentaconnect.com/content/aalas/jaalas/2018/00000057/00000001/art00004">[link]</a></p>
<small><i>Journal of the American Association for Laboratory Animal Science</i>, (2018)</small>
<p>Evaluation of 6 Methods for Aerobic Bacterial Sanitization of Smartphones (2018)</p>
<small><a href="https://www.ingentaconnect.com/content/aalas/jaalas/2018/00000057/00000001/art00004"><i>Journal of the American Association for Laboratory Animal Science</i></a></small>
</li>

<li class="list-group-item">
<p>Reassortment of influenza A viruses in wild birds in Alaska before H5 clade 2.3. 4.4 outbreaks. <a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5367406/">[link]</a></p>
<small><i>Emerging Infectious Diseases</i>, (2017)</small>
<p>Reassortment of influenza A viruses in wild birds in Alaska before H5 clade 2.3. 4.4 outbreaks (2017)</p>
<small><a href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5367406/"><i>Emerging Infectious Diseases</i></a></small>
</li>

<li class="list-group-item">
<p>A real-time surveillance dashboard for monitoring viral phenotype from sequence. <a href="http://www.ijidonline.com/article/S1201-9712(16)31510-7/abstract">[link]</a></p>
<small><i>International Journal of Infectious Diseases</i>, (2016)</small>
<p>A real-time surveillance dashboard for monitoring viral phenotype from sequence (2016)</p>
<small><a href="http://www.ijidonline.com/article/S1201-9712(16)31510-7/abstract"><i>International Journal of Infectious Diseases</i></a></small>
</li>

<li class="list-group-item">
<p>Evidence of seasonality in a host-pathogen system: Influenza across the annual cycle of wild birds. <a href="http://www.sicb.org/meetings/2016/schedule/abstractdetails.php?id=502">[link]</a></p>
<small><i>Integrative and Comparative Biology</i>, (2016)</small>
<p>Evidence of seasonality in a host-pathogen system: Influenza across the annual cycle of wild birds (2016)</p>
<small><a href="http://www.sicb.org/meetings/2016/schedule/abstractdetails.php?id=502"><i>Integrative and Comparative Biology</i></a></small>
</li>

<li class="list-group-item">
<p>A point mutation in the polymerase protein PB2 allows a reassortant H9N2 influenza isolate of wild-bird origin to replicate in human cells. <a href="https://www.sciencedirect.com/science/article/pii/S156713481630137X">[link]</a></p>
<small><i>Infection, Genetics and Evolution</i>, (2016)</small>
<p>A point mutation in the polymerase protein PB2 allows a reassortant H9N2 influenza isolate of wild-bird origin to replicate in human cells (2016)</p>
<small><a href="https://www.sciencedirect.com/science/article/pii/S156713481630137X"><i>Infection, Genetics and Evolution</i></a></small>
</li>

<li class="list-group-item">
<p>New England harbor seal H3N8 influenza virus retains avian-like receptor specificity. <a href="https://www.nature.com/articles/srep21428">[link]</a></p>
<small><i>Scientific Reports</i>, (2016)</small>
<p>New England harbor seal H3N8 influenza virus retains avian-like receptor specificity (2016)</p>
<small><a href="https://www.nature.com/articles/srep21428"><i>Scientific Reports</i></a></small>
</li>

<li class="list-group-item">
<p>Ecosystem interactions underlie the spread of avian influenza a viruses with pandemic potential. <a href="http://onlinelibrary.wiley.com/doi/10.1111/ele.12629/abstract">[link]</a></p>
<small><i>PLOS Pathogens</i>, (2016)</small>
<p>Ecosystem interactions underlie the spread of avian influenza a viruses with pandemic potential (2016)</p>
<small><a href="http://onlinelibrary.wiley.com/doi/10.1111/ele.12629/abstract"><i>PLOS Pathogens</i></a></small>
</li>

<li class="list-group-item">
<p>Transmission of influenza reflects seasonality of wild birds across the annual cycle. <a href="http://onlinelibrary.wiley.com/doi/10.1111/ele.12629/abstract">[link]</a></p>
<small><i>Ecology Letters</i>, (2016)</small>
<p>Transmission of influenza reflects seasonality of wild birds across the annual cycle (2016)</p>
<small><a href="http://onlinelibrary.wiley.com/doi/10.1111/ele.12629/abstract"><i>Ecology Letters</i></a></small>
</li>

<li class="list-group-item">
<p>Reticulate evolution is favored in influenza niche switching. <a href="http://www.pnas.org/content/113/19/5335.full">[link]</a></p>
<small><i>PNAS</i>, (2016)</small>
<p>Reticulate evolution is favored in influenza niche switching (2016)</p>
<small><a href="http://www.pnas.org/content/113/19/5335.full"><i>PNAS</i></a></small>
</li>

<li class="list-group-item">
<p>Genetic characterization of a rare H12N3 avian influenza virus isolated from a green-winged teal in Japan. <a href="https://link.springer.com/article/10.1007/s11262-014-1162-9">[link]</a></p>
<small><i>Virus Genes</i>, (2015)</small>
<p>Genetic characterization of a rare H12N3 avian influenza virus isolated from a green-winged teal in Japan (2015)</p>
<small><a href="https://link.springer.com/article/10.1007/s11262-014-1162-9"><i>Virus Genes</i></a></small>
</li>

</ul>
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4 changes: 2 additions & 2 deletions templates/resume.html
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Expand Up @@ -119,8 +119,8 @@ <h2><i class="fa fa-bookmark"></i> Publications</h2>
<ul class="list-group">
{% for pub in resume['publications']|sort(attribute='year')|reverse %}
<li class="list-group-item">
<p>{{ pub['title'] }}. <a href="{{ pub['url'] }}">[link]</a></p>
<small><i>{{ pub['journal'] }}</i>, ({{ pub['year'] }})</small>
<p>{{ pub['title'] }} ({{ pub['year'] }})</p>
<small><a href="{{ pub['url'] }}"><i>{{ pub['journal'] }}</i></a></small>
</li>
{% endfor %}
</ul>
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