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Round 4

RokGrah edited this page Jun 28, 2023 · 22 revisions

In Round 4, we aim to explore the impact of two biological scenario axes on the COVID-19 burden in the EU/EEA. The first axis relates to the extent of waning immunity that is obtained from past vaccinations, past infections, or both (hybrid immunity). The second axis explores different scenarios on the emergence of a new SARS-CoV-2 (sub-)variants. This scenario round will yield crucial epidemiological insights for public health professionals and the people in the the EU/EEA, by exploring plausible future scenarios in which the COVID-19 pandemic situation is dominated by uncertainty pertaining to virological and immunological drivers.


Round 4 scenarios

No new variant
  • Projections are initialised in agreement with the SARS-CoV-2 variants that are circulating at the start of the projection period
New variant (sub-lineage) X
  • Introduction: From 1st May 2023, at least of 0.1% of all new infections are due to a new variant X over 16 weeks
  • Characteristics: Variant X has 30% immune escape against infection and 0% immune escape against severe outcomes, and the same intrinsic transmissibility and severity as currently dominating Omicron sub-lineage
Optimistic waning
  • Protection against infection: 6 months median time to transition to 70% of the initial immunity
  • Protection against severe outcomes: no waning
Scenario A Scenario B
Pessimistic waning
  • Protection against infection: 6 months median time to transition to 40% of the initial immunity
  • Protection against severe outcomes: 6 months median time to transition to 80% of the initial immunity
Scenario C Scenario D

Below we cover scenario details for:

See elsewhere: data links for cross-European data sources.


Waning of protection

We consider two scenarios for immunity waning.

  • Optimistic waning

    • Protection against infection: 6 months median time to transition to 70% of the initial immunity (decrease of 30%)
    • Protection against severe outcomes: no waning
  • Pessimistic waning

    • Protection against infection: 6 months median time to transition to 40% of the initial immunity (decrease of 60%)
    • Protection against severe outcomes: 6 months median time to transition to 80% of the initial immunity (decrease of 20%)

Shared assumptions

We ask all modellers to include the following parameters:

  • No plateau existing for immunity against infection
  • The parameters for the waning speed of protection relate to the waning since the most recent vaccination or infection

Assumptions left to modeller judgement

Modellers should use their own judgement and relevant literature if making assumptions about the following:

  • Functional shape of waning immunity against infection and against severe outcomes (following the above specified decrease of immunity against infection within the specified time frame)

New variants

We look at the impact of a new variant (sub-lineage).

  • Baseline: No new variant

  • New variant (sub-lineage) X

    • Introduction: From 1st May 2023, at least of 0.1% of all new infections are due to a new variant X over 16 weeks
  • Characteristics: Variant X has 30% immune escape against infection and 0% immune escape against severe outcomes, and the same intrinsic transmissibility and severity and currently dominant Omicron sub-lineange(s). The immune escape relates to all types of immunity (vaccine induced, past infection(s), hybrid immunity)

Additional assumptions

Shared assumptions

  • No new public health and social measures (non-pharmaceutical interventions / NPIs)
  • No changes in demography
  • No novel drugs that significantly alleviate the COVID-19 burden
  • No new vaccination campaigns, vaccination uptake continues with the current trends

Assumptions left to modeller judgement

  • The absolute value of vaccine effectiveness and protection from past infections for all outcomes
  • Contact rates in response to infection rates
  • Impact of seasonality, including seasonal behavioural changes

Submission information

Projections

Projection period

  • Projection period is March 15th 2023 to December 31st 2023

Changes to formatting compared to previous rounds

  • We ask that teams no longer include the following fields (columns):
    • origin_date (redundant with the file name)
    • target_end_date (redundant with the horizon field)

Targets

Teams can submit any of the below targets.

Target target_variable Notes
Incident infections inc infection Please only provide incident cases (inc case) if unable to model infections
Incident hospital admissions inc hosp We no longer ask for ICU (critical care) admissions
Incident deaths inc death

Age groups

We ask for submissions to include results for each of three age groups, identified in a new column age_id. We suggest age brackets below.

Age group age_id
Children (0-17 years) child
Adult (18-59 years) adult
Older population (60+ years) older
Age breakdown not available Do not include age_id column
  • If your model is already age-structured and it is difficult to change the exact age-bands, please follow as closely as you can and let us know where your age-groups differ
  • If a breakdown by age is not possible, please continue to submit for all age groups combined (and leave out the age_id column)

Scenario IDs

Please use the following codes to identify between scenarios in the scenario_id column, with one for each value (row) in your submission csv.

Scenario scenario_id
Scenario A. No new variant, optimistic waning A
Scenario B. New variant X, optimistic waning B
Scenario C. No new variant, pessimistic waning C
Scenario D. New variant X, pessimistic waning D

Model abstract

Please include an abstract for your model as part of your submission.

  • Copy the Round 4 Abstract template
  • Complete where you can - all comments are appreciated
  • Save this to the model-abstracts/2023-03-15 folder, adjusting the filename to MyTeam-MyModel.md

Key dates

The dates for Round 4 are:

Round 4 date
Submissions due March 17 2023
End date for fitting data (last day of epiweek) March 14 2023
origin_date (first possible date of a daily simulation) March 15 2022