Merge branch 'release/v0.9.1'

evalclass · Jan 7, 2021 · f66d342 · f66d342
2 parents bac70d6 + 735cc9e
commit f66d342
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diff --git a/.travis.yml b/.travis.yml
@@ -14,8 +14,15 @@ r:
   - release
   - devel
 cache: packages
-sudo: false
 warnings_are_errors: true
+sudo: required
+
+apt_packages:
+  - r-cran-rjava
+
+# https://travis-ci.community/t/configuring-a-travis-yml-for-a-package-that-depends-on-rjava/9983
+before_install:
+  - sudo $(which R) CMD javareconf
 
 matrix:
   exclude:

diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,8 +1,8 @@
 Package: prcbench
 Type: Package
 Title: Testing Workbench for Precision-Recall Curves
-Version: 0.9.0
-Date: 2021-01-04
+Version: 0.9.1
+Date: 2021-01-07
 Authors@R: c(
     person("Takaya", "Saito", email = "takaya.saito@outlook.com", role = c("aut", "cre")),
     person("Marc", "Rehmsmeier", email = "marc.rehmsmeier@ii.uib.no", role = c("aut")))

diff --git a/NEWS.md b/NEWS.md
@@ -1,3 +1,7 @@
+# precrec 0.9.1
+
+* Update Travis configurations for rJava
+
 # precrec 0.9
 
 * Improve code quality using the results from lintr and CodeFactor.io

diff --git a/README.md b/README.md
@@ -148,13 +148,13 @@ res <- run_benchmark(testset, toolset)
 knitr::kable(res$tab, digits = 2)
 ```
 
-| testset | toolset | toolname      |  min |   lq |  mean | median |    uq |    max | neval |
-| :------ | :------ | :------------ | ---: | ---: | ----: | -----: | ----: | -----: | ----: |
-| b10     | auc5    | AUCCalculator | 3.29 | 3.91 | 11.29 |   5.91 |  8.09 |  35.26 |     5 |
-| b10     | auc5    | PerfMeas      | 0.07 | 0.08 | 92.09 |   0.08 |  0.10 | 460.11 |     5 |
-| b10     | auc5    | precrec       | 7.13 | 8.14 | 40.73 |   8.34 | 13.89 | 166.15 |     5 |
-| b10     | auc5    | PRROC         | 0.22 | 0.23 |  1.60 |   0.23 |  0.25 |   7.09 |     5 |
-| b10     | auc5    | ROCR          | 2.52 | 2.63 | 20.91 |   3.12 | 42.51 |  53.74 |     5 |
+| testset | toolset | toolname      |  min |   lq |   mean | median |    uq |    max | neval |
+| :------ | :------ | :------------ | ---: | ---: | -----: | -----: | ----: | -----: | ----: |
+| b10     | auc5    | AUCCalculator | 3.64 | 5.32 |  12.23 |   5.69 |  7.10 |  39.42 |     5 |
+| b10     | auc5    | PerfMeas      | 0.10 | 0.11 | 117.44 |   0.12 |  0.14 | 586.76 |     5 |
+| b10     | auc5    | precrec       | 5.60 | 6.74 |  49.48 |   8.54 | 21.37 | 205.13 |     5 |
+| b10     | auc5    | PRROC         | 0.25 | 0.26 |   4.48 |   0.31 |  0.31 |  21.27 |     5 |
+| b10     | auc5    | ROCR          | 2.88 | 3.85 |  24.01 |   6.20 | 49.66 |  57.46 |     5 |
 
 ### Evaluation of precision-recall curves
 

diff --git a/cran-comments.md b/cran-comments.md
@@ -1,12 +1,12 @@
-## Version 0.9.0
+## Version 0.9.1
 This is a submission for updating the already published package - prcbench.
 
 In this version I have:
 
 * Improve code quality using the results from lintr and CodeFactor.io
 
 * Updated the version.
-    * 0.8.2 -> 0.9.0
+    * 0.8.2 -> 0.9.1
 
 ## Test environments
 * local macOS High Sierra, R 4.0.3

diff --git a/docs/404.html b/docs/404.html
diff --git a/docs/LICENSE-text.html b/docs/LICENSE-text.html
diff --git a/docs/articles/index.html b/docs/articles/index.html
diff --git a/docs/articles/introduction.html b/docs/articles/introduction.html
diff --git a/docs/authors.html b/docs/authors.html
diff --git a/docs/index.html b/docs/index.html
diff --git a/docs/news/index.html b/docs/news/index.html
diff --git a/docs/pkgdown.yml b/docs/pkgdown.yml
@@ -3,5 +3,5 @@ pkgdown: 1.6.1
 pkgdown_sha: ~
 articles:
   introduction: introduction.html
-last_built: 2021-01-07T03:42Z
+last_built: 2021-01-07T07:10Z
 
diff --git a/docs/reference/C1DATA.html b/docs/reference/C1DATA.html
diff --git a/docs/reference/C2DATA.html b/docs/reference/C2DATA.html
diff --git a/docs/reference/C3DATA.html b/docs/reference/C3DATA.html
diff --git a/docs/reference/C4DATA.html b/docs/reference/C4DATA.html
diff --git a/docs/reference/TestDataB.html b/docs/reference/TestDataB.html
diff --git a/docs/reference/TestDataC.html b/docs/reference/TestDataC.html
diff --git a/docs/reference/ToolAUCCalculator.html b/docs/reference/ToolAUCCalculator.html
diff --git a/docs/reference/ToolIFBase.html b/docs/reference/ToolIFBase.html
diff --git a/docs/reference/ToolPRROC.html b/docs/reference/ToolPRROC.html
diff --git a/docs/reference/ToolPerfMeas.html b/docs/reference/ToolPerfMeas.html
diff --git a/docs/reference/ToolROCR.html b/docs/reference/ToolROCR.html
diff --git a/docs/reference/Toolprecrec.html b/docs/reference/Toolprecrec.html
diff --git a/docs/reference/autoplot.html b/docs/reference/autoplot.html
diff --git a/docs/reference/create_example_func.html b/docs/reference/create_example_func.html
diff --git a/docs/reference/create_testset.html b/docs/reference/create_testset.html
diff --git a/docs/reference/create_toolset.html b/docs/reference/create_toolset.html
diff --git a/docs/reference/create_usrdata.html b/docs/reference/create_usrdata.html
diff --git a/docs/reference/create_usrtool.html b/docs/reference/create_usrtool.html
diff --git a/docs/reference/index.html b/docs/reference/index.html
diff --git a/docs/reference/prcbench.html b/docs/reference/prcbench.html