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eweitz committed Apr 28, 2021
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Expand Up @@ -18,18 +18,7 @@ <h1>Custom organism | Ideogram</h1>
<a href="mouse">Next</a> |
<a href="https://github.com/eweitz/ideogram/blob/gh-pages/custom.html" target="_blank">Source</a>
<p>
A custom genome is depicted below. The grey and black bands in each chromosome
represent
<a href="https://en.wikipedia.org/wiki/Heterochromatin">heterochromatin</a>.
The pink region is the area around the
<a href="https://en.wikipedia.org/wiki/Centromere">centromere</a>, and the blue represents variable regions.
</p>
<p>
This ideogram shows most chromosomes in a
<a href="https://en.wikipedia.org/wiki/Ploidy">haploid</a> state for
simplicity. For more accurate, diploid representation of custom genomes,
see <a href="ploidy-basic">Ploidy, basic</a> and
<a href="multiple-trio">Multiple, trio</a>.
A custom genome is depicted below. This example shows how you can fetch chromosome data via API and plot it with Ideogram.</a>.
</p>
<script type="text/javascript">

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