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Add new publications, code, tutorials
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WardLT committed Jun 22, 2023
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Examples
========

Examples of using Colmena in the scientific literature and in other open-source codes.
Presentations about Colmena, examples of using Colmena in the scientific literature, and in other open-source codes.

Tutorials
---------

Presentations focused on how to use Colmena

- Exascale Computing Project's 2023 Annual Meeting [`YouTube <https://youtu.be/XiU0SI1SyRU>`_]

Publications
------------
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[`ArXiv <https://arxiv.org/abs/2110.02827>`_]
[`slides <https://www.researchgate.net/publication/357777568>`_]
[`YouTube <https://youtu.be/-3KnbJcm-tQ>`_]
- Ward et al. "Cloud Services Enable Efficient AI-Guided Simulation Workflows across Heterogeneous Resources".
*Heterogenous Computing Workshop at IPDPS 2023*
[`ArXiv <https://arxiv.org/abs/2303.08803>`_]
[`slides <https://www.researchgate.net/publication/371753699>`_]
[`YouTube <https://youtu.be/KO7anZs4G48>`_]

Applications of Colmena
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[`ChemRxiv <https://doi.org/10.26434/chemrxiv-2022-8w9ft>`_]
- Zvyagin et al. "GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics."
[`bioRxiv <https://doi.org/10.1101/2022.10.10.511571>`_]

Open-Source Software
--------------------

Other codes which use Colmena

- `ExaMol <https://github.com/exalearn/ExaMol>`_: Performs molecule design on HPC by combining AI and quantum chemistry (same devs as Colmena)

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