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Incompatible with python3 #6
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Do you have a python3 compatible version of CellStar @amoghpj? I have run in to the same problem. |
Hi, I do not have a functional version of python3 yet. It looks like the conversion is non-trivial, and needs some in-depth understanding of the code. If the author of the project @Fafa87 thinks this is worthwhile, I would be willing to help with the effort, but in the meantime, I have used it successfully in a python2 virtual environment. |
I managed to get it to run in Python 3.7, with quite a bit of modifications that "seem" not to affect the segmentation. I think partially it is also related to versions of libraries having different behaviour. Check the included libraries.txt for my version. The CellProfiler plugin doesn't work for me either, but yeah the last proven version I think is cell profiler 2 which doesn't even start. |
Python3 compatibility almost done. |
cellstar should work with python3 now |
There are tons of incompatibilities with python3. I am trying to fix them but without a better understanding of the whole project, a dumb translation might not be ideal. Any plans for python3 support?
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