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felixlangschied edited this page Jun 22, 2021 · 1 revision

CM construction

MAX_N_PID

Example:

--ERROR: MAX_N_PID exceded -- Recompile changing the value of MAX_N_PID (current: 260000 Requested: 2346303)

This T-Coffee error has been encountered when running ncOrtho on a SLURM scheduler. It can be fixed by installing the beta version of T-Coffee, as explained in this discussion. With the beta version of T-Coffee, you can increase the MAX_N_PID value according to your needs. Include a similar line to the script calling ncOrtho for this:

export MAX_N_PID_4_TCOFFEE=4194304

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