Orientation of medical images

• FSL – Orientation Explained
• rordenlab / NIfTIspace
• NiBabel – Defining the DICOM orientation
• NiBabel – Image voxel orientation
• NiBabel – Coordinate systems and affines
• NiBabel – Working with NIfTI images
• NiBabel – Radiological vs neurological conventions
• NIPY – Some discussion notes on coordinate maps
• DICOM is Easy – Getting Oriented using the Image Plane Module

Abbreviations

Abbreviation	Meaning
FSL	FMRIB Software Library
FMRIB	fMRI of the Brain
fMRI	Functional MRI
MRI	Magnetic Resonance Imaging
DICOM	Digital Imaging and Communications in Medicine
NIfTI	Neuroimaging Informatics Technology Initiative