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DESCRIPTION

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+Package: rawDiag
+Type: Package
+Title: Diagnostic Plots for Mass Spectrometry Data
+Version: 0.0.1
+Authors@R: c(person("Christian", "Panse", email = "cp@fgcz.ethz.ch", role = c("aut", "cre"), 
+        comment = c(ORCID = "0000-0003-1975-3064")),
+	person("Christian", "Trachsel", email = "jg@fgcz.ethz.ch", role = "aut", "cre"))
+Author: Christian Panse [aut] (0000-0003-1975-3064),
+	Christian Trachsel [aut, cre] (0000-0002-6899-9020),
+Maintainer: Christian Panse <cp@fgcz.ethz.ch>
+Depends: R (>= 3.3),
+	methods
+Imports: ggplot2 (>= 2.2.1),
+	dplyr,
+	hexbin,
+	tidyr,
+	magrittr,
+	scales,
+	tidyverse
+Description: Helps with quality checks, visualizations 
+    and analysis of mass spectrometry data, coming from proteomics 
+    experiments. The package is developed, tested and used at the Functional 
+    Genomics Center Zurich. We use this package mainly for prototyping, 
+    teaching, and having fun with proteomics data. But it can also be 
+    used to do data analysis for small scale data sets.
+License: GPL-3
+URL: https://github.com/fgcz/rawDiag/
+BugReports: https://github.com/fgcz/rawDiag/issues
+Encoding: UTF-8
+LazyData: true
+NeedsCompilation: no
+RoxygenNote: 6.0.1

NAMESPACE

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+# Generated by roxygen2: do not edit by hand
+
+S3method(cycle,time.violin)
+export(.benchmark)
+export(as.rawDiag)
+export(calc.cycle.time)
+export(calc.master.scan)
+export(charge.state)
+export(charge.state.overlay)
+export(charge.state.violin)
+export(cycle.load)
+export(cycle.load.overlay)
+export(cycle.load.violin)
+export(cycle.time)
+export(cycle.time.overlay)
+export(cycle.time.violin)
+export(fillNAgaps)
+export(getWU163763)
+export(injection.time)
+export(injection.time.overlay)
+export(is.rawDiag)
+export(lm.correction)
+export(lm.correction.overlay)
+export(lm.correction.violin)
+export(mass.distribution)
+export(mass.distribution.overlay)
+export(mass.distribution.violin)
+export(mass.heatmap)
+export(mz.distribution)
+export(mz.distribution.overlay)
+export(mz.distribution.violin)
+export(precursor.heatmap)
+export(read.raw)
+export(scan.frequ.moving.aver)
+export(scan.frequency)
+export(scan.frequency.overlay)
+export(scan.frequency.violin)
+export(scan.time)
+export(scan.time.overlay)
+export(scan.time.violin)
+export(summary.rawDiag)
+export(tic.basepeak)
+export(tic.basepeak.overlay)
+export(tic.basepeak.violin)
+import(dplyr)
+import(ggplot2)
+import(hexbin)
+import(scales)
+import(tidyr)
+importFrom(stats,na.omit)
+importFrom(stats,quantile)
+importFrom(utils,read.csv)