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finkbeiner-lab

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Popular repositories

GEDI-ORDER GEDI-ORDER Public

Use cell morphology to determine if the cell is live or dead with a CNN.

Python 1 1
Galaxy_Installer Galaxy_Installer Public

Installs Galaxy automatically on macOS

Shell 1
Galaxy_Tool_Shed Galaxy_Tool_Shed Public

An additional Galaxy Tool Shed for the Finkbeiner Lab's custom tools

Python 1
microscopeimagequality microscopeimagequality Public

Forked from google/microscopeimagequality

Python
cellpose cellpose Public

Forked from MouseLand/cellpose

a generalist algorithm for cellular segmentation

Jupyter Notebook
AutoComet AutoComet Public

Comet Assay

Jupyter Notebook 1

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Showing 10 of 18 repositories

Galaxy_Tool_Shed Public
An additional Galaxy Tool Shed for the Finkbeiner Lab's custom tools

Python 1 MIT 0 0 0 Updated Jun 4, 2024
GEDI-ORDER Public
Use cell morphology to determine if the cell is live or dead with a CNN.

Python 1 Apache-2.0 1 0 8 Updated May 31, 2024
Galaxy_Installer Public
Installs Galaxy automatically on macOS

Shell 1 MIT 0 0 0 Updated May 30, 2024
semi-supervised-learning Public Forked from pgrosjean/wsi_ssl
This is a simple repository containing a single training script for fine-tuning DINO V2 with the DINO V1 loss for whole slide images in histopathology.

Python 0 1 0 0 Updated May 14, 2024
amyb-plaque-detection Public

HTML 0 0 0 4 Updated May 9, 2024
datastudy Public
Analysis Pipeline Using Nextflow

Python 0 0 0 2 Updated Apr 18, 2024
FeatureAnalysis Public

Jupyter Notebook 0 0 0 0 Updated Mar 27, 2024
qupath-tooling Public Forked from qupath/qupath
Custom extensions to QuPath - bioimage analysis & digital pathology

Java 0 GPL-3.0 270 0 0 Updated Aug 30, 2023
GP-Image-Classification-1pass Public

Python 0 0 0 0 Updated Jul 5, 2023
AutoComet Public
Comet Assay

Jupyter Notebook 0 1 1 0 Updated Feb 6, 2023

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