Fix typos

R/def_aa.R

@@ -85,7 +85,7 @@ print.bioseq_aa <- function(x, n_bases = 60, n_seq = 12,
                   seq_type = "AA", color = color)
 }
 
-#' Internal formating
+#' Internal formatting
 #'
 #' @param x a object.
 #' @param ... other params.

R/def_dna.R

@@ -84,7 +84,7 @@ print.bioseq_dna <- function(x, n_bases = 60, n_seq = 12,
                   seq_type = "DNA", color = color)
 }
 
-#' Internal formating
+#' Internal formatting
 #'
 #' @param x an object.
 #' @param ... other params.

R/def_rna.R

@@ -85,7 +85,7 @@ print.bioseq_rna <- function(x, n_bases = 60, n_seq = 12,
 }
 
 
-#' Internal formating
+#' Internal formatting
 #'
 #' @param x a object.
 #' @param ... other params.

R/seq_biological_operations.R

@@ -36,7 +36,7 @@ seq_rev_transcribe <- function(x) {
 #' @param codon_frame an integer giving the nucleotide position
 #' where to start translation.
 #' @param codon_init a logical indicating whether the first codon is evaluated
-#' as a possible codon start and tranlated to methionine.
+#' as a possible codon start and translated to methionine.
 #'
 #' @details
 #'

R/seq_string_operation.R

@@ -386,7 +386,7 @@ seq_extract_position <- function(x, position_in, position_out){
 #' string as separator.
 #'
 #' @details
-#' The strings \code{sep} and \code{collapse}w ill be coercced to
+#' The strings \code{sep} and \code{collapse}w ill be coerced to
 #' the type of input vectors with a warning if some character have to replaced.
 #'
 #' @return A vector of sequences (if collapse is \code{NULL}).

R/seq_summarize_operations.R

@@ -23,7 +23,7 @@
 #'}
 #'
 #' @return An integer vector with group memberships.
-#' @family agreggation operations
+#' @family aggregation operations
 #' @seealso Function \code{\link{seq_consensus}} to compute consensus
 #' and representative sequences for clusters.
 #'
@@ -85,11 +85,11 @@ seq_cluster <- function(x, threshold = 0.05, method = "complete") {
 #' @details
 #' "chr_majority", "chr_ambiguity", "seq_centrality", "seq_majority"
 #'
-#' For chr_ambiguity gap character always overide other characters.
+#' For chr_ambiguity gap character always override other characters.
 #' Use gaps = FALSE to ignore gaps.
 #'
 #' @return A consensus sequence
-#' @family agreggation operations
+#' @family aggregation operations
 #' @export
 #'
 #' @examples