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@asistradition asistradition released this 14 Sep 16:24
· 59 commits to release since this release
v0.6.0
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Learn about vigilant mode.

Inferelator v0.6.0 September 14, 2022

New Functionality:

  • Support for grouping arbitrary genes from multiple tasks into learning groups
  • Workflow to learn homology groups together
  • Workflow to explicitly incorporate velocity and decay into learning
  • Added support for batching parallelization calls to reduce overhead when data is relatively small

Code Refactoring:

  • Refactored multi-task learning to parameterize tfs and genes for each task
  • Refactored parallelization around joblib & dask
  • Removed pathos and replaced with joblib
  • Optimized StARS-LASSO by replacing standalone LASSO with lasso_path

Bug Fixes:

  • Fixed several messages to be more informative
  • use_no_prior is appropriately applied in multitask learning
Assets 2