Merge pull request #33 from flindersuni/feature/landing

Landing-Page Update & ToC Fix
flindersuni · Feb 9, 2022 · 435e064 · 435e064
2 parents 58f6021 + 88ef754
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diff --git a/docs/source/index.rst b/docs/source/index.rst
@@ -3,12 +3,6 @@ Welcome to the DeepThought Documentation
 
 The new Flinder HPC is called DeepThought. This new HPC comprises of AMD EPYC based hardware and next-generation management software, allowing for a dynamic and agile HPC service. 
 
-.. _Upgrade Migration Information: migration/upgrademigration.html
-
-.. warning::
-    DeepThought has recently undergone a series of upgrades that require some user intervention when utlising the upgraded cluster.
-    Please see `Upgrade Migration Information`_ for actions required.
-
 .. attention::
     This documentation is under active development, meaning that it can
     change over time as we improve it. Please email deepthought@flinders.edu.au if
@@ -70,10 +64,13 @@ Table of Contents
 
     software/softwaresuitesoverview.rst
     software/ansys.rst
-    software/lammps.rst
+    software/delft3d.rst 
+    software/gromacs.rst
     software/jupyter.rst
-    software/singularity.rst
+    software/lammps.rst
     software/matlab.rst
+    software/singularity.rst
+    software/vasp.rst
 
 
 .. toctree::

diff --git a/docs/source/migration/upgrademigration.rst b/docs/source/migration/upgrademigration.rst
diff --git a/docs/source/software/delft3d.rst b/docs/source/software/delft3d.rst
@@ -1,5 +1,5 @@
 -------------------------
-Delft3D Suite
+Delft3D 
 -------------------------
 =======
 Status

diff --git a/docs/source/software/gromacs.rst b/docs/source/software/gromacs.rst
@@ -1,6 +1,6 @@
--------------------------
-GROMACS Engineering Suite 
--------------------------
+--------
+GROMACS 
+--------
 =======
 Status
 =======

diff --git a/docs/source/software/singularity.rst b/docs/source/software/singularity.rst
@@ -1,14 +1,14 @@
 ========================
 Singularity Containers
 ========================
-=======
+--------
 Status
-=======
+--------
 The Singularity Container Engine is available for use on the HPC. 
 
-==========
+---------
 Overview
-==========
+---------
 .. _here: https://singularity.hpcng.org/user-docs/master/
 
 Singularity is the most common container engine used for HPC.  With the capability to run most container formats, including Docker,