Jupyter notebook with 2D test potential energy landscape for performing model biased simulations combined with pathway analysis as describes in S. Wolf, M. Post and G. Stock, Path separation of dissipation-corrected targeted molecular dynamics simulations of protein-ligand unbinding, https://arxiv.org/abs/2212.07154 (2022).
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Jupyter notebook with 2D test potential energy landscape for performing model biased simulations combined with pathway analysis.
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