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Add NovaSeq 6000 as recognised sequencing platform #205

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merged 2 commits into from Jul 14, 2022
Merged

Add NovaSeq 6000 as recognised sequencing platform #205

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664c658
bcftbx/IlluminaData: add 'novaseq6000' to the list in KNOWN_PLATFORMS.
pjbriggs Jul 14, 2022
e0a710f
bcftbx/platforms: add description for 'novaseq6000' platform.
pjbriggs Jul 14, 2022
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3 changes: 2 additions & 1 deletion bcftbx/IlluminaData.py
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@@ -1,5 +1,5 @@
# IlluminaData.py: module for handling data about Illumina sequencer runs
# Copyright (C) University of Manchester 2012-2021 Peter Briggs
# Copyright (C) University of Manchester 2012-2022 Peter Briggs
#
########################################################################
#
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'hiseq4000',
'miseq',
'nextseq',
'novaseq6000',
'miniseq',
'iseq')

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3 changes: 2 additions & 1 deletion bcftbx/platforms.py
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@@ -1,7 +1,7 @@
#!/usr/bin/env python
#
# platforms.py: utilities and data to identify sequencer platforms
# Copyright (C) University of Manchester 2013-2018 Peter Briggs
# Copyright (C) University of Manchester 2013-2022 Peter Briggs
#
########################################################################
#
Expand All @@ -26,6 +26,7 @@
PLATFORMS['miseq'] = "Illumina MISeq"
PLATFORMS['miniseq'] = "MiniSeq"
PLATFORMS['nextseq'] = "Illumina NextSeq"
PLATFORMS['novaseq6000'] = "NovaSeq 6000"
PLATFORMS['iseq'] = "Illumina iSeq"
PLATFORMS['illumina'] = "Unknown/Illumina"
PLATFORMS['other'] = "Unknown/external"
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