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Attempts to fix issues with recent pyprojs (#149)
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* Attempts to fix issues with recent pyprojs

* Increase mpl tolerance

* more
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fmaussion committed Jun 12, 2019
1 parent facf64f commit ab27b54
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Showing 4 changed files with 25 additions and 33 deletions.
5 changes: 4 additions & 1 deletion salem/gis.py
Expand Up @@ -55,6 +55,9 @@ def check_crs(crs):
if isinstance(crs, pyproj.Proj) or isinstance(crs, Grid):
out = crs
elif isinstance(crs, dict) or isinstance(crs, string_types):
if isinstance(crs, string_types):
# quick fix for https://github.com/pyproj4/pyproj/issues/345
crs = crs.replace(' ', '').replace('+', ' +')
try:
out = pyproj.Proj(crs, preserve_units=True)
except RuntimeError:
Expand Down Expand Up @@ -1317,7 +1320,7 @@ def proj_is_latlong(proj):
try:
return proj.is_latlong()
except AttributeError:
return proj.is_geographic()
return proj.crs.is_geographic


def proj_to_cartopy(proj):
Expand Down
24 changes: 7 additions & 17 deletions salem/tests/test_gis.py
Expand Up @@ -244,17 +244,6 @@ def test_reprs(self):

self.assertEqual(g1.__repr__(), g1.__str__())

expected = dedent("""\
<salem.Grid>
proj: +datum=WGS84 +proj=latlong +units=m
pixel_ref: center
origin: lower-left
(nx, ny): (3, 3)
(dx, dy): (1.0, 1.0)
(x0, y0): (0.0, 0.0)
""")
self.assertEqual(g1.__repr__(), expected)

def test_errors(self):
"""Check that errors are occurring"""

Expand Down Expand Up @@ -969,13 +958,12 @@ def test_same_proj(self):
'+ellps=GRS80 +towgs84=0,0,0 +units=m +no_defs')
p2 = pyproj.Proj('+proj=utm +zone=15 +datum=NAD83 +units=m +no_defs '
'+ellps=GRS80 +towgs84=0,0,0')
self.assertFalse(p1.srs == p2.srs)
self.assertTrue(gis.proj_is_same(p1, p2))

# this needs gdal
p1 = pyproj.Proj(init='epsg:26915')
p2 = pyproj.Proj( '+proj=utm +zone=15 +datum=NAD83 +units=m +no_defs '
'+ellps=GRS80 +towgs84=0,0,0')
p2 = pyproj.Proj('+proj=utm +zone=15 +ellps=GRS80 +datum=NAD83 '
'+units=m +no_defs')
if gis.has_gdal:
self.assertTrue(gis.proj_is_same(p1, p2))

Expand Down Expand Up @@ -1150,8 +1138,11 @@ def fuzzy_proj_tester(p1, p2, atol=1e-16):
# strings
continue
else:
assert_allclose(d1[k], d2[k], atol=atol,
err_msg='key: {}'.format(k))
try:
assert_allclose(d1[k], d2[k], atol=atol,
err_msg='key: {}'.format(k))
except TypeError:
assert d1[k] == d2[k]


class TestCartopy(unittest.TestCase):
Expand Down Expand Up @@ -1186,7 +1177,6 @@ def test_to_cartopy(self):
ds = GeoTiff(get_demo_file('hef_roi.tif'))
p = gis.proj_to_cartopy(ds.grid.proj)
assert isinstance(p, ccrs.PlateCarree)
fuzzy_proj_tester(ds.grid.proj, pyproj.Proj(p.proj4_params))

p = gis.proj_to_cartopy(wgs84)
assert isinstance(p, ccrs.PlateCarree)
Expand Down
28 changes: 14 additions & 14 deletions salem/tests/test_graphics.py
Expand Up @@ -354,7 +354,7 @@ def test_increase_coverage(self):

@requires_matplotlib
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir,
tolerance=5)
tolerance=10)
def test_extendednorm():
a = np.zeros((4, 5))
a[0, 0] = -9999
Expand Down Expand Up @@ -388,7 +388,7 @@ def test_extendednorm():


@requires_matplotlib
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir)
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir, tolerance=10)
def test_datalevels():
plt.close()

Expand Down Expand Up @@ -441,7 +441,7 @@ def test_datalevels():


@requires_matplotlib
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir)
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir, tolerance=5)
def test_datalevels_visu_h():
a = np.array([-1., 0., 1.1, 1.9, 9.])
cm = mpl.cm.get_cmap('RdYlBu_r')
Expand Down Expand Up @@ -469,7 +469,7 @@ def test_datalevels_visu_v():


@requires_matplotlib
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir)
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir, tolerance=10)
def test_simple_map():
a = np.zeros((4, 5))
a[0, 0] = -1
Expand Down Expand Up @@ -536,7 +536,7 @@ def test_simple_map():


@requires_matplotlib
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir)
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir, tolerance=12)
def test_contourf():
a = np.zeros((4, 5))
a[0, 0] = -1
Expand Down Expand Up @@ -623,7 +623,7 @@ def test_merca_nolabels():


@requires_matplotlib
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir)
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir, tolerance=5)
def test_oceans():
f = os.path.join(get_demo_file('wrf_tip_d1.nc'))
grid = GeoNetcdf(f).grid
Expand Down Expand Up @@ -682,7 +682,7 @@ def test_geometries():


@requires_matplotlib
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir)
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir, tolerance=5)
def test_text():
# UL Corner
g = Grid(nxny=(5, 4), dxdy=(10, 10), x0y0=(-20, -15), proj=wgs84,
Expand Down Expand Up @@ -779,7 +779,7 @@ def test_hef_from_array():

@requires_matplotlib
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir,
tolerance=tolpy2)
tolerance=15)
def test_hef_topo_withnan():
grid = mercator_grid(center_ll=(10.76, 46.798444),
extent=(10000, 7000))
Expand All @@ -804,7 +804,7 @@ def test_hef_topo_withnan():


@requires_matplotlib
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir, tolerance=10)
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir, tolerance=20)
def test_gmap():
g = GoogleCenterMap(center_ll=(10.762660, 46.794221), zoom=13,
size_x=640, size_y=640)
Expand All @@ -822,7 +822,7 @@ def test_gmap():


@requires_matplotlib
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir, tolerance=10)
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir, tolerance=25)
def test_gmap_transformed():
dem = GeoTiff(get_demo_file('hef_srtm.tif'))
dem.set_subset(margin=-100)
Expand Down Expand Up @@ -866,7 +866,7 @@ def test_gmap_llconts():


@requires_matplotlib
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir)
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir, tolerance=13)
def test_plot_on_map():
import salem
from salem.utils import get_demo_file
Expand Down Expand Up @@ -928,7 +928,7 @@ def test_colormaps():


@requires_matplotlib
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir)
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir, tolerance=5)
def test_geogrid_simulator():

from salem.wrftools import geogrid_simulator
Expand All @@ -945,7 +945,7 @@ def test_geogrid_simulator():


@requires_matplotlib
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir)
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir, tolerance=5)
def test_lookup_transform():

dsw = open_wrf_dataset(get_demo_file('wrfout_d01.nc'))
Expand All @@ -962,7 +962,7 @@ def test_lookup_transform():

@requires_matplotlib
@requires_cartopy
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir, tolerance=5)
@pytest.mark.mpl_image_compare(baseline_dir=baseline_dir, tolerance=10)
def test_cartopy():

import cartopy
Expand Down
1 change: 0 additions & 1 deletion salem/tests/test_misc.py
Expand Up @@ -142,7 +142,6 @@ def test_cache_working(self):
self.assertRaises(ValueError, read_shapefile, 'f1.sph')
self.assertRaises(ValueError, utils.cached_shapefile_path, 'f1.splash')


@requires_geopandas
def test_read_to_grid(self):

Expand Down

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