updated settings

.gitignore

@@ -1,3 +1,4 @@
 migrated
 workspaces/
 .ipynb_checkpoints/
+.virtual_documents/

environment.yml

@@ -3,9 +3,9 @@ channels:
   - conda-forge
   - defaults
 dependencies:
+  - _libgcc_mutex=0.1=main
   - ansiwrap=0.8.4=py_0
   - appdirs=1.4.3=py37h28b3542_0
-  - appnope=0.1.0=py37_0
   - asn1crypto=1.3.0=py37_0
   - async_generator=1.10=py37h28b3542_0
   - attrs=19.3.0=py_0
@@ -18,17 +18,19 @@ dependencies:
   - bleach=3.1.0=py37_0
   - ca-certificates=2020.1.1=0
   - certifi=2019.11.28=py37_0
-  - cffi=1.13.2=py37hb5b8e2f_0
+  - cffi=1.13.2=py37h2e261b9_0
   - chardet=3.0.4=py37_1003
   - click=7.0=py37_0
   - colorama=0.4.3=py_0
-  - cryptography=2.8=py37ha12b0ac_0
+  - cryptography=2.8=py37h1ba5d50_0
   - decorator=4.4.1=py_0
   - defusedxml=0.6.0=py_0
   - entrypoints=0.3=py37_0
   - future=0.18.2=py37_0
   - gitdb2=2.0.6=py_0
   - gitpython=3.0.5=py_0
+  - gmp=6.1.2=h6c8ec71_1
+  - icu=64.2=he1b5a44_1
   - idna=2.8=py37_0
   - importlib_metadata=1.5.0=py37_0
   - inflect=4.1.0=py37_0
@@ -49,31 +51,33 @@ dependencies:
   - jupyterlab_pygments=0.1.0=py_0
   - jupyterlab_server=1.0.6=py_0
   - jupytext=1.3.3=0
-  - libcxx=4.0.1=hcfea43d_1
-  - libcxxabi=4.0.1=hcfea43d_1
-  - libedit=3.1.20181209=hb402a30_0
-  - libffi=3.2.1=h475c297_4
-  - libgfortran=3.0.1=h93005f0_2
-  - libsodium=1.0.16=h3efe00b_0
-  - markupsafe=1.1.1=py37h1de35cc_0
-  - mistune=0.8.4=py37h1de35cc_0
+  - ld_impl_linux-64=2.33.1=h53a641e_7
+  - libedit=3.1.20181209=hc058e9b_0
+  - libffi=3.2.1=hd88cf55_4
+  - libgcc-ng=9.1.0=hdf63c60_0
+  - libgfortran-ng=7.3.0=hdf63c60_0
+  - libsodium=1.0.16=h1bed415_0
+  - libstdcxx-ng=9.1.0=hdf63c60_0
+  - libuv=1.34.0=h516909a_0
+  - markupsafe=1.1.1=py37h7b6447c_0
+  - mistune=0.8.4=py37h7b6447c_0
   - mkl=2020.0=166
-  - mkl-service=2.3.0=py37hfbe908c_0
-  - mkl_fft=1.0.15=py37h5e564d8_0
-  - mkl_random=1.1.0=py37ha771720_0
+  - mkl-service=2.3.0=py37he904b0f_0
+  - mkl_fft=1.0.15=py37ha843d7b_0
+  - mkl_random=1.1.0=py37hd6b4f25_0
   - more-itertools=8.2.0=py_0
   - nb_conda=2.2.1=py37_0
   - nb_conda_kernels=2.2.2=py37_0
   - nbconvert=5.6.1=py37_0
   - nbdime=1.1.0=py37_0
   - nbformat=5.0.4=py_0
-  - ncurses=6.1=h0a44026_1
-  - nodejs=10.13.0=h0a44026_0
+  - ncurses=6.1=he6710b0_1
+  - nodejs=13.8.0=h10a4023_0
   - notebook=6.0.3=py37_0
-  - numpy=1.18.1=py37h7241aed_0
-  - numpy-base=1.18.1=py37h6575580_1
-  - openssl=1.1.1d=h1de35cc_3
-  - pandas=1.0.0=py37h6c726b0_0
+  - numpy=1.18.1=py37h4f9e942_0
+  - numpy-base=1.18.1=py37hde5b4d6_1
+  - openssl=1.1.1d=h7b6447c_3
+  - pandas=1.0.0=py37h0573a6f_0
   - pandoc=2.2.3.2=0
   - pandocfilters=1.4.2=py37_1
   - papermill=1.2.1=py37_0
@@ -87,28 +91,28 @@ dependencies:
   - pycparser=2.19=py37_0
   - pygments=2.5.2=py_0
   - pyopenssl=19.1.0=py37_0
-  - pyrsistent=0.15.7=py37h1de35cc_0
+  - pyrsistent=0.15.7=py37h7b6447c_0
   - pysocks=1.7.1=py37_0
-  - python=3.7.6=h359304d_2
+  - python=3.7.6=h0371630_2
   - python-dateutil=2.8.1=py_0
   - pytz=2019.3=py_0
-  - pyyaml=5.3=py37h1de35cc_0
-  - pyzmq=18.1.1=py37h0a44026_0
-  - readline=7.0=h1de35cc_5
+  - pyyaml=5.3=py37h7b6447c_0
+  - pyzmq=18.1.1=py37he6710b0_0
+  - readline=7.0=h7b6447c_5
   - requests=2.22.0=py37_1
   - rise=5.6.0=py37_0
   - send2trash=1.5.0=py37_0
   - setuptools=45.1.0=py37_0
   - six=1.14.0=py37_0
   - smmap2=2.0.5=py37_0
-  - sqlite=3.31.1=ha441bb4_0
+  - sqlite=3.31.1=h7b6447c_0
   - tenacity=6.0.0=py37_0
   - terminado=0.8.3=py37_0
   - testpath=0.4.4=py_0
   - textwrap3=0.9.2=py_0
-  - tk=8.6.8=ha441bb4_0
+  - tk=8.6.8=hbc83047_0
   - toml=0.10.0=py37h28b3542_0
-  - tornado=6.0.3=py37h1de35cc_0
+  - tornado=6.0.3=py37h7b6447c_0
   - tqdm=4.42.0=py_0
   - traitlets=4.3.3=py37_0
   - urllib3=1.25.8=py37_0
@@ -117,15 +121,16 @@ dependencies:
   - webencodings=0.5.1=py37_1
   - wheel=0.34.2=py37_0
   - widgetsnbextension=3.5.1=py37_0
-  - xz=5.2.4=h1de35cc_4
-  - yaml=0.1.7=hc338f04_2
-  - zeromq=4.3.1=h0a44026_3
+  - xz=5.2.4=h14c3975_4
+  - yaml=0.1.7=had09818_2
+  - zeromq=4.3.1=he6710b0_3
   - zipp=2.1.0=py_0
-  - zlib=1.2.11=h1de35cc_3
+  - zlib=1.2.11=h7b6447c_3
   - pip:
     - jedi==0.15.2
     - jupyter-lsp==0.7.0b0
     - jupyterlab-code-formatter==1.0.3
+    - jupyterlab-git==0.9.0
     - jupyterlab-quickopen==0.3.0
     - packaging==19.2
     - pluggy==0.13.1

init.ipynb

@@ -188,7 +188,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 4,
+   "execution_count": 2,
    "metadata": {
     "Collapsed": "false"
    },
@@ -198,18 +198,20 @@
      "output_type": "stream",
      "text": [
       "Installing @jupyterlab/toc ...\n",
+      "Installing @jupyterlab/git ...\n",
       "Installing @jupyterlab/celltags ...\n",
+      "Installing @jupyterlab/shortcutui ...\n",
       "Installing @krassowski/jupyterlab-lsp ...\n",
       "Installing @parente/jupyterlab-quickopen ...\n",
       "Installing @aquirdturtle/collapsible_headings ...\n",
       "Installing @lckr/jupyterlab_variableinspector ...\n",
       "Installing @jupyter-widgets/jupyterlab-manager ...\n",
       "Installing @ryantam626/jupyterlab_code_formatter ...\n",
       "Installing jupyterlab-jupytext ...\n",
-      "\n",
+      "Installing nbdime-jupyterlab ...\n",
       "Building ...\n",
       "[LabBuildApp] JupyterLab 1.2.6\n",
-      "[LabBuildApp] Building in /Users/mederic/.anaconda/envs/ide/share/jupyter/lab\n",
+      "[LabBuildApp] Building in /home/fmind/.anaconda/envs/ide/share/jupyter/lab\n",
       "[LabBuildApp] Building jupyterlab assets (build:prod:minimize)\n"
      ]
     },
@@ -219,14 +221,15 @@
        "'DONE'"
       ]
      },
-     "execution_count": 4,
+     "execution_count": 2,
      "metadata": {},
      "output_type": "execute_result"
     }
    ],
    "source": [
     "LAB_EXTENSIONS = [\n",
     "    '@jupyterlab/toc',\n",
+    "    '@jupyterlab/git',\n",
     "    '@jupyterlab/celltags',\n",
     "    '@krassowski/jupyterlab-lsp',\n",
     "    '@parente/jupyterlab-quickopen',\n",
@@ -240,7 +243,7 @@
     "\n",
     "for extension in LAB_EXTENSIONS:\n",
     "    print(f'Installing {extension} ...')\n",
-    "    !jupyter labextension install --no-build $extension\n",
+    "    !jupyter labextension install --no-build \"$extension\"\n",
     "\n",
     "print('Building ...')\n",
     "!jupyter lab build\n",
@@ -258,7 +261,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 5,
+   "execution_count": 3,
    "metadata": {
     "Collapsed": "false"
    },
@@ -269,7 +272,7 @@
      "text": [
       "Enabling jupyterlab_code_formatter ...\n",
       "Enabling: jupyterlab_code_formatter\n",
-      "- Writing config: /Users/mederic/.jupyter\n",
+      "- Writing config: /home/fmind/.jupyter\n",
       "    - Validating...\n",
       "      jupyterlab_code_formatter  \u001b[32mOK\u001b[0m\n"
      ]
@@ -280,7 +283,7 @@
        "'DONE'"
       ]
      },
-     "execution_count": 5,
+     "execution_count": 3,
      "metadata": {},
      "output_type": "execute_result"
     }

lab/user-settings/@jupyterlab/git/plugin.jupyterlab-settings

@@ -0,0 +1,22 @@
+{
+    // Git
+    // @jupyterlab/git:plugin
+    // jupyterlab-git settings.
+    // ************************
+
+    // Disable branch with changes
+    // Disable all branch operations (new, switch) when there are changed/staged files
+    "disableBranchWithChanges": false,
+
+    // History count
+    // Number of (most recent) commits shown in the history log
+    "historyCount": 25,
+
+    // Refresh interval
+    // Number of milliseconds between polling the file system for changes.
+    "refreshInterval": 3000,
+
+    // Simple staging flag
+    // If true, use a simplified concept of staging. Only files with changes are shown (instead of showing staged/changed/untracked), and all files with changes will be automatically staged
+    "simpleStaging": false
+}