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fomightez
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{ | ||
"cells": [ | ||
{ | ||
"cell_type": "markdown", | ||
"metadata": {}, | ||
"source": [ | ||
"# PatMatch-binder\n", | ||
"## PatMatch stand-alone, command line-based software in your browser\n", | ||
"\n", | ||
"Welcome. Select a notebook below to get started.\n", | ||
"\n", | ||
"If in doubt, start with the one at the top and work down.\n", | ||
"\n", | ||
"## Notebooks\n", | ||
"\n", | ||
"- [PatMatch initial demo and introduction](notebooks/PatMatch%20initial%20demo%20and%20introduction.ipynb)\n", | ||
"- [PatMatch with Python basics](notebooks/PatMatch%20with%20Python%20basics.ipynb)\n", | ||
"- [PatMatch with a Genome and Protein + Python](notebooks/PatMatch%20with%20Genome%20and%20Python.ipynb)\n", | ||
"- [PatMatch with more Python](notebooks/PatMatch%20with%20more%20Python.ipynb)\n", | ||
"\n", | ||
"-----\n", | ||
"\n", | ||
"\n", | ||
"## Additional topics\n", | ||
"- [PatMatch nucleic handling flags demystified](notebooks/PatMatch%20nucleic%20handling%20flags%20demystified.ipynb)\n", | ||
"- [Advanced: Sending PatMatch output directly to Python](notebooks/Sending%20PatMatch%20output%20directly%20to%20Python.ipynb)" | ||
] | ||
}, | ||
{ | ||
"cell_type": "code", | ||
"execution_count": null, | ||
"metadata": {}, | ||
"outputs": [], | ||
"source": [] | ||
} | ||
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"metadata": { | ||
"kernelspec": { | ||
"display_name": "Python 3", | ||
"language": "python", | ||
"name": "python3" | ||
}, | ||
"language_info": { | ||
"codemirror_mode": { | ||
"name": "ipython", | ||
"version": 3 | ||
}, | ||
"file_extension": ".py", | ||
"mimetype": "text/x-python", | ||
"name": "python", | ||
"nbconvert_exporter": "python", | ||
"pygments_lexer": "ipython3", | ||
"version": "3.6.5" | ||
} | ||
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"nbformat": 4, | ||
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} |