Skip to content

Issues: fungenomics/braindex

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

19 Open 35 Closed
19 Open 35 Closed
Author
Filter by author
Label
Filter by label
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Milestones
Filter by milestone
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Height of dendrogram bubble plot dependent on number of genes in file bug Something isn't working clusters-app
#68 opened May 2, 2024 by bhavyaac
2 tasks
@bhavyaac
Heatmap not being produced bug Something isn't working clusters-app
#67 opened May 2, 2024 by bhavyaac
@bhavyaac
Solve bookmarking bug: store file input genes in variable with text input genes bug Something isn't working clusters-app
#63 opened Dec 16, 2021 by bhavyaac
@bhavyaac
Allow individual gene selection in dimensionality reduction tabs clusters-app enhancement New feature or request
#62 opened Dec 16, 2021 by bhavyaac
@bhavyaac
Add download functionality for marker tables clusters-app enhancement New feature or request
#58 opened Oct 29, 2021 by bhavyaac
@bhavyaac
Subset & visualize single cells based on gene expression thresholds clusters-app enhancement New feature or request
#53 opened Sep 9, 2021 by bhavyaac
5 tasks
@bhavyaac
Improve input validation to detect typos & synonymous genes clusters-app documentation Improvements or additions to documentation enhancement New feature or request
#51 opened Aug 2, 2021 by bhavyaac
@bhavyaac
Implement nested cell type selection in heatmap tab clusters-app enhancement New feature or request
#49 opened Jul 30, 2021 by bhavyaac
@bhavyaac
1
Handle all-zero (?) expression rescaling in heatmap bug Something isn't working clusters-app documentation Improvements or additions to documentation
#45 opened Jul 29, 2021 by bhavyaac
@bhavyaac
1
Deal with excessive table width: horizontal scroll, freeze column(s), move search box aesthetics Visual changes to existing features to improve user experience clusters-app
#40 opened Jul 12, 2021 by bhavyaac
@bhavyaac
2
Adjust alignment of the gene labels with the dendrogram bubble plots aesthetics Visual changes to existing features to improve user experience clusters-app
#39 opened Jul 12, 2021 by bhavyaac
@bhavyaac
For 2D gene plotting, fix the case when a gene has 0 expression in all samples in one region bug Something isn't working clusters-app
#35 opened Jun 26, 2021 by sjessa
@bhavyaac
4
Implement interactivity for heatmaps enhancement New feature or request grn-app
#29 opened Jun 18, 2021 by sjessa
@CooberHoo
Add searchable analyses of network/regulon changes over timecourse enhancement New feature or request grn-app priority
#24 opened Jun 18, 2021 by sjessa
@CooberHoo
Add quantification of user input gene lists within TF regulons enhancement New feature or request grn-app priority
#22 opened Jun 18, 2021 by sjessa
@CooberHoo
Plot mean expression (over selected genes) in a separate bubble plot clusters-app enhancement New feature or request priority
#18 opened Jun 16, 2021 by bhavyaac
@bhavyaac
Refactor code to use new timepoints dataset for existing app functions clusters-app priority refactor Changes to code/back end that won't alter functionality
#11 opened Jun 14, 2021 by bhavyaac
@bhavyaac
Implement more granular reactivity in joint expression tabs clusters-app refactor Changes to code/back end that won't alter functionality
#9 opened Jun 8, 2021 by bhavyaac
@bhavyaac
Explain differences between dimensionality reductions, scaling clusters-app documentation Improvements or additions to documentation grn-app
#6 opened Jun 9, 2020 by sjessa
@sjessa @bhavyaac @CooberHoo
1
ProTip! Add no:assignee to see everything that’s not assigned.