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SeqViz_example

How to use Vanilla version (not react) of SeqViz

Installation

Create conda environment for node.js.

conda create -n seqviz nodejs
conda activate seqviz
npm install -g seqparse

Convert SnapGene file.

seqparse ./data/snapgene/addgene-plasmid-113168-sequence-217924.dna > ./data/addgene113168.json

You now have a JSON file named addgene113168.json in the data folder. You can open up index.html and view it simply by adding the file prefix as a hash:

http://127.0.0.1:5500/#addgene113168

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How to use Vanilla version (not react) of SeqViz

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