Features:
- Added support for BigWig files in a new Continuous Data object (#63) New endpoints and message types include:
- POST /continuoussets/search
- GET /continuoussets/{id}
- POST /continuous/search
- Continuous (new)
- ContinuousSet (new)
- Add ability to list and join peer server networks (#60) New endpoints and message types include:
- POST /peers/list
- POST /peers/announce
- GET /info
- ListPeersResponse (new)
- Peer (new)
- AnnouncePeerResponse (new)
- GetInfoResponse (new)
- Remove feature_id from ExpressionLevel and add ability to search by the Name field (#67) Impacts
- POST /expressionlevels/search
- GET /expressionlevels/{id}
- Replaced info fields with rich type Attributes fields (#46) Impacts the following message types:
- TranscriptEffect
- VariantAnnotation
- Individual
- Biosample
- Experiment (new)
- Analysis (new)
- Dataset
- ReadGroup
- ReadGroupSet
- ReadAlignment
- Reference
- ReferenceSet
- RnaQuantificationSet
- RnaQuantification
- ExpressionLevel
- Feature
- VariantSetMetadata
- CallSet
- Call
- Variant
- Replace NCBI taxon ID integer with ontology term. Impacts the following message types:
- Reference
- ReferenceSet
- Changed ontology term “id” to “term_id” (#48) Impacts the following message types:
- OntologyTerm
Documentation:
- Created a basic Info page for the Pypi repository (#68)
Bugfix release which uses the new release process.
Bugfix release which fixes the following issues:
- wrong attributes on RnaQuantification (#53)
- wrong attributes on ExpressionLevels (#51)
A new versioning scheme has been introduced that will make it easy to tell which version of the client to use against a protocol version!
- Calls are now returned as ListValues and can be int32, empty, or strings
to cover the case when a VCF call states no call was made.
- Refactor "BioSample" to "Biosample".
- Switch to stable protobuf version (3.1).
- Improve generated documentation.
- Add authorization via headers.
Add hierachical namespace
Release using new ga4gh packages, ga4gh-common and ga4gh-schemas
Initial release